Detail information of GWHGAAEX006775/evm.TU.scaffold_19.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743840606|ref|XP_010937308.1|5.43E-45PREDICTED: protein TIFY 10B-like [Elaeis guineensis]
Swissprottr|Q9LMA8|TI10A_ARATH2.00E-21Protein TIFY 10A
trEMBLtr|M0U095|M0U095_MUSAM9.00E-41Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P14370_001}
TAIRAT1G191807.00E-21jasmonate-zim-domain protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002022845022286332+
Transcript Sequence

Network for GWHGAAEX006775

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06200.13tify751081.10E-16
PF09425.9CCT_21251504.10E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTify

KEGG pathway

KO Enzyme pathway mapID
K13464JAZ Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.380
SRR2545915Juvenile tuber77.700
SRP108465SRR5643513five period of Gastrodia elata58.770
SRR5643514five period of Gastrodia elata45.840
SRR5643515five period of Gastrodia elata188.710
SRR5643524five period of Gastrodia elata78.510
SRR5643525five period of Gastrodia elata257.420
SRR5643528five period of Gastrodia elata676.560
SRR5643658five period of Gastrodia elata226.240
SRR5643659five period of Gastrodia elata57.590
SRR5643660five period of Gastrodia elata31.140
SRR5643661five period of Gastrodia elata60.800
SRR5643662five period of Gastrodia elata89.250
SRR5643663five period of Gastrodia elata50.390
SRR5643664five period of Gastrodia elata67.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.250
SRR6049655Rhizomagastrodiae_C368-T10_good_117.530
SRR6049656Rhizomagastrodiae_C368-T07_good_124.610
SRR6049657Rhizomagastrodiae_C368-T07_good_126.210
SRR6049658Rhizomagastrodiae_C368-T04_good_128.790
SRR6049659Rhizomagastrodiae_C368-T04_good_128.170
SRR6049660Rhizomagastrodiae_C368-T01_good_162.340
SRR6049661Rhizomagastrodiae_C368-T04_good_135.210
SRR6049662Rhizomagastrodiae_C368-T01_good_162.010
SRR6049663Rhizomagastrodiae_C368-T01_good_186.490
SRR6049664Rhizomagastrodiae_C368-T10_good_123.770
SRR6049665Rhizomagastrodiae_C368-T10_good_123.770
SRP279888GastroGastrodia elata tuber 33.00
JuvenJuvenile tuber65.47
Mother_GastroMother tuber of Gastrodia elata 1,048.68
Mother_JuvenMother tuber of Juvenile 1,154.39