Detail information of GWHGAAEX006784/evm.TU.scaffold_19.103


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695053472|ref|XP_009414828.1|8.65E-113PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q338N2|C3H62_ORYSJ2.00E-70Zinc finger CCCH domain-containing protein 62
trEMBLtr|W1PC69|W1PC69_AMBTC8.00E-104Uncharacterized protein {ECO:0000313|EMBL:ERN05548.1}
TAIRAT5G668403.00E-55SAP domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002024438562457923+
Transcript Sequence

Network for GWHGAAEX006784

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02037.26SAP3073402.30E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.320
SRR2545915Juvenile tuber0.720
SRP108465SRR5643513five period of Gastrodia elata4.470
SRR5643514five period of Gastrodia elata9.740
SRR5643515five period of Gastrodia elata9.470
SRR5643524five period of Gastrodia elata7.890
SRR5643525five period of Gastrodia elata9.970
SRR5643528five period of Gastrodia elata18.150
SRR5643658five period of Gastrodia elata9.040
SRR5643659five period of Gastrodia elata2.610
SRR5643660five period of Gastrodia elata2.420
SRR5643661five period of Gastrodia elata2.500
SRR5643662five period of Gastrodia elata6.350
SRR5643663five period of Gastrodia elata3.500
SRR5643664five period of Gastrodia elata0.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.270
SRR6049655Rhizomagastrodiae_C368-T10_good_15.800
SRR6049656Rhizomagastrodiae_C368-T07_good_14.670
SRR6049657Rhizomagastrodiae_C368-T07_good_11.810
SRR6049658Rhizomagastrodiae_C368-T04_good_11.850
SRR6049659Rhizomagastrodiae_C368-T04_good_11.070
SRR6049660Rhizomagastrodiae_C368-T01_good_13.060
SRR6049661Rhizomagastrodiae_C368-T04_good_12.440
SRR6049662Rhizomagastrodiae_C368-T01_good_18.250
SRR6049663Rhizomagastrodiae_C368-T01_good_15.420
SRR6049664Rhizomagastrodiae_C368-T10_good_16.530
SRR6049665Rhizomagastrodiae_C368-T10_good_16.530
SRP279888GastroGastrodia elata tuber 2.49
JuvenJuvenile tuber8.35
Mother_GastroMother tuber of Gastrodia elata 5.34
Mother_JuvenMother tuber of Juvenile 6.04