Detail information of GWHGAAEX006789/evm.TU.scaffold_19.109


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743888476|ref|XP_010910626.1|2.81E-174PREDICTED: F-box only protein 13 [Elaeis guineensis]
Swissprottr|Q9SMZ3|FBX13_ARATH6.00E-122F-box only protein 13
trEMBLtr|M0RLE6|M0RLE6_MUSAM5.00E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P25720_001}
TAIRAT4G331603.00E-119F-box family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002025383242540671+
Transcript Sequence

Network for GWHGAAEX006789

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.32F-box24591.20E-09
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.150
SRR2545915Juvenile tuber18.170
SRP108465SRR5643513five period of Gastrodia elata9.100
SRR5643514five period of Gastrodia elata7.040
SRR5643515five period of Gastrodia elata10.700
SRR5643524five period of Gastrodia elata8.250
SRR5643525five period of Gastrodia elata24.780
SRR5643528five period of Gastrodia elata36.590
SRR5643658five period of Gastrodia elata21.060
SRR5643659five period of Gastrodia elata18.550
SRR5643660five period of Gastrodia elata17.620
SRR5643661five period of Gastrodia elata13.060
SRR5643662five period of Gastrodia elata9.040
SRR5643663five period of Gastrodia elata8.710
SRR5643664five period of Gastrodia elata16.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.820
SRR6049655Rhizomagastrodiae_C368-T10_good_117.550
SRR6049656Rhizomagastrodiae_C368-T07_good_121.730
SRR6049657Rhizomagastrodiae_C368-T07_good_124.870
SRR6049658Rhizomagastrodiae_C368-T04_good_114.250
SRR6049659Rhizomagastrodiae_C368-T04_good_113.710
SRR6049660Rhizomagastrodiae_C368-T01_good_124.300
SRR6049661Rhizomagastrodiae_C368-T04_good_122.930
SRR6049662Rhizomagastrodiae_C368-T01_good_113.730
SRR6049663Rhizomagastrodiae_C368-T01_good_119.140
SRR6049664Rhizomagastrodiae_C368-T10_good_116.010
SRR6049665Rhizomagastrodiae_C368-T10_good_116.010
SRP279888GastroGastrodia elata tuber 9.01
JuvenJuvenile tuber16.48
Mother_GastroMother tuber of Gastrodia elata 40.12
Mother_JuvenMother tuber of Juvenile 12.24