Detail information of GWHGAAEX006794/evm.TU.scaffold_19.114
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|108757998|ref|YP_629034.1| | 9.00E-50 | PfkB family kinase [Myxococcus xanthus DK 1622] |
| KOG | KOG2855 | 2.00E-115 | Ribokinase |
| nr | gi|695017437|ref|XP_009395657.1| | 1.12E-148 | PREDICTED: uncharacterized protein LOC103980860 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O82616|SCRK5_ARATH | 7.00E-07 | Probable fructokinase-5 |
| trEMBL | tr|M0SLW7|M0SLW7_MUSAM | 3.00E-149 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P07500_001} |
| TAIR | AT5G58730 | 2.00E-115 | pfkB-like carbohydrate kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000020 | 2686037 | 2696555 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006794
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00294.23 | PfkB | 211 | 282 | 3.40E-16 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K19517 | MIK | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Inositol phosphate metabolism | map00562 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016773 | Molecular Function | phosphotransferase activity, alcohol group as acceptor |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.420 |
| SRR2545915 | Juvenile tuber | 12.980 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 43.170 |
| SRR5643514 | five period of Gastrodia elata | 50.650 | |
| SRR5643515 | five period of Gastrodia elata | 41.990 | |
| SRR5643524 | five period of Gastrodia elata | 45.910 | |
| SRR5643525 | five period of Gastrodia elata | 84.960 | |
| SRR5643528 | five period of Gastrodia elata | 94.270 | |
| SRR5643658 | five period of Gastrodia elata | 77.400 | |
| SRR5643659 | five period of Gastrodia elata | 34.830 | |
| SRR5643660 | five period of Gastrodia elata | 38.070 | |
| SRR5643661 | five period of Gastrodia elata | 35.860 | |
| SRR5643662 | five period of Gastrodia elata | 35.650 | |
| SRR5643663 | five period of Gastrodia elata | 33.730 | |
| SRR5643664 | five period of Gastrodia elata | 31.980 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 33.400 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 34.870 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 32.310 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 26.990 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 33.630 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 27.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.460 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.990 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 43.390 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 41.320 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 50.170 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 50.170 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 34.71 |
| Juven | Juvenile tuber | 44.41 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 96.47 | |
| Mother_Juven | Mother tuber of Juvenile | 75.40 |