Detail information of GWHGAAEX006802/evm.TU.scaffold_19.126
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|262196756|ref|YP_003267965.1| | 2.00E-29 | serine/threonine protein kinase [Haliangium ochraceum DSM 14365] |
| KOG | KOG1151 | 0 | Tousled-like protein kinase |
| nr | gi|672109385|ref|XP_008789869.1| | 0 | PREDICTED: serine/threonine-protein kinase TOUSLED [Phoenix dactylifera] |
| Swissprot | tr|Q39238|TSL_ARATH | 0 | Serine/threonine-protein kinase TOUSLED |
| trEMBL | tr|W1NDJ0|W1NDJ0_AMBTC | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERM93612.1} |
| TAIR | AT5G20930 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000020 | 2981737 | 2999680 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006802
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 395 | 667 | 3.40E-59 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | TLK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 91.910 |
| SRR2545915 | Juvenile tuber | 79.180 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 40.790 |
| SRR5643514 | five period of Gastrodia elata | 43.070 | |
| SRR5643515 | five period of Gastrodia elata | 37.390 | |
| SRR5643524 | five period of Gastrodia elata | 40.850 | |
| SRR5643525 | five period of Gastrodia elata | 67.000 | |
| SRR5643528 | five period of Gastrodia elata | 47.240 | |
| SRR5643658 | five period of Gastrodia elata | 62.600 | |
| SRR5643659 | five period of Gastrodia elata | 53.380 | |
| SRR5643660 | five period of Gastrodia elata | 56.970 | |
| SRR5643661 | five period of Gastrodia elata | 51.480 | |
| SRR5643662 | five period of Gastrodia elata | 62.210 | |
| SRR5643663 | five period of Gastrodia elata | 62.770 | |
| SRR5643664 | five period of Gastrodia elata | 74.120 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 43.840 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 53.380 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 43.610 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 50.090 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 37.030 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 37.060 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 38.250 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 32.430 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.940 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.170 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 35.810 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 35.810 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 57.88 |
| Juven | Juvenile tuber | 58.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 36.21 | |
| Mother_Juven | Mother tuber of Juvenile | 41.31 |