Detail information of GWHGAAEX006805/evm.TU.scaffold_19.129


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|148656458|ref|YP_001276663.1|7.00E-123small GTP-binding protein [Roseiflexus sp. RS-1]
KOGKOG04100Predicted GTP binding protein
nrgi|743774613|ref|XP_010917666.1|0PREDICTED: putative GTP-binding protein 6 [Elaeis guineensis]
Swissprottr|Q0WTB4|Y3725_ARATH2.00E-36GTP-binding protein At3g49725, chloroplastic (Precursor)
trEMBLtr|K3ZHX7|K3ZHX7_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si026179m}
TAIRAT5G579600GTP-binding protein, HflX

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002030816233153058+
Transcript Sequence

Network for GWHGAAEX006805

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13167.5GTP-bdg_N1522413.60E-32
PF16360.4GTP-bdg_M2443219.60E-27
PF01926.22MMR_HSR13294471.50E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.480
SRR2545915Juvenile tuber21.060
SRP108465SRR5643513five period of Gastrodia elata16.200
SRR5643514five period of Gastrodia elata14.750
SRR5643515five period of Gastrodia elata12.290
SRR5643524five period of Gastrodia elata14.730
SRR5643525five period of Gastrodia elata36.340
SRR5643528five period of Gastrodia elata16.190
SRR5643658five period of Gastrodia elata12.530
SRR5643659five period of Gastrodia elata11.090
SRR5643660five period of Gastrodia elata15.400
SRR5643661five period of Gastrodia elata11.940
SRR5643662five period of Gastrodia elata16.180
SRR5643663five period of Gastrodia elata14.890
SRR5643664five period of Gastrodia elata15.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.280
SRR6049655Rhizomagastrodiae_C368-T10_good_114.200
SRR6049656Rhizomagastrodiae_C368-T07_good_112.040
SRR6049657Rhizomagastrodiae_C368-T07_good_112.340
SRR6049658Rhizomagastrodiae_C368-T04_good_19.760
SRR6049659Rhizomagastrodiae_C368-T04_good_19.960
SRR6049660Rhizomagastrodiae_C368-T01_good_110.280
SRR6049661Rhizomagastrodiae_C368-T04_good_111.700
SRR6049662Rhizomagastrodiae_C368-T01_good_115.230
SRR6049663Rhizomagastrodiae_C368-T01_good_112.630
SRR6049664Rhizomagastrodiae_C368-T10_good_113.180
SRR6049665Rhizomagastrodiae_C368-T10_good_113.180
SRP279888GastroGastrodia elata tuber 14.49
JuvenJuvenile tuber58.44
Mother_GastroMother tuber of Gastrodia elata 26.37
Mother_JuvenMother tuber of Juvenile 38.00