Detail information of GWHGAAEX006812/evm.TU.scaffold_19.136


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720080444|ref|XP_010241975.1|1.86E-38PREDICTED: general transcription factor 3C polypeptide 6-like isoform X2 [Nelumbo nucifera]
trEMBLtr|M0RP94|M0RP94_MUSAM5.00E-38Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P04140_001}
TAIRAT3G154205.00E-27Transcription factor TFIIIC, tau55-related protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002033143513340308-
Transcript Sequence

Network for GWHGAAEX006812

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10419.8TFIIIC_sub639716.30E-11
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.660
SRR2545915Juvenile tuber21.330
SRP108465SRR5643513five period of Gastrodia elata15.060
SRR5643514five period of Gastrodia elata14.990
SRR5643515five period of Gastrodia elata14.950
SRR5643524five period of Gastrodia elata13.560
SRR5643525five period of Gastrodia elata12.180
SRR5643528five period of Gastrodia elata11.250
SRR5643658five period of Gastrodia elata9.910
SRR5643659five period of Gastrodia elata25.000
SRR5643660five period of Gastrodia elata26.630
SRR5643661five period of Gastrodia elata22.090
SRR5643662five period of Gastrodia elata26.410
SRR5643663five period of Gastrodia elata26.680
SRR5643664five period of Gastrodia elata29.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.940
SRR6049655Rhizomagastrodiae_C368-T10_good_115.910
SRR6049656Rhizomagastrodiae_C368-T07_good_113.740
SRR6049657Rhizomagastrodiae_C368-T07_good_113.380
SRR6049658Rhizomagastrodiae_C368-T04_good_111.880
SRR6049659Rhizomagastrodiae_C368-T04_good_114.020
SRR6049660Rhizomagastrodiae_C368-T01_good_111.400
SRR6049661Rhizomagastrodiae_C368-T04_good_113.820
SRR6049662Rhizomagastrodiae_C368-T01_good_115.520
SRR6049663Rhizomagastrodiae_C368-T01_good_114.780
SRR6049664Rhizomagastrodiae_C368-T10_good_114.170
SRR6049665Rhizomagastrodiae_C368-T10_good_114.170
SRP279888GastroGastrodia elata tuber 28.89
JuvenJuvenile tuber15.50
Mother_GastroMother tuber of Gastrodia elata 16.33
Mother_JuvenMother tuber of Juvenile 18.77