Detail information of GWHGAAEX006814/evm.TU.scaffold_19.138


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|110638409|ref|YP_678618.1|6.00E-18patatin-like protein [Cytophaga hutchinsonii ATCC 33406]
KOGKOG05133.00E-95Ca2+-independent phospholipase A2
nrgi|743803479|ref|XP_010926930.1|1.05E-151PREDICTED: patatin-like protein 3 [Elaeis guineensis]
Swissprottr|Q8H5D4|PLP3_ORYSJ1.00E-96Patatin-like protein 3
trEMBLtr|M1AFB1|M1AFB1_SOLTU4.00E-125Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400021555}
TAIRAT3G549503.00E-95patatin-like protein 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002033858333388879+
Transcript Sequence

Network for GWHGAAEX006814

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.630
SRR2545915Juvenile tuber2.890
SRP108465SRR5643513five period of Gastrodia elata14.610
SRR5643514five period of Gastrodia elata36.350
SRR5643515five period of Gastrodia elata11.350
SRR5643524five period of Gastrodia elata19.530
SRR5643525five period of Gastrodia elata121.790
SRR5643528five period of Gastrodia elata82.410
SRR5643658five period of Gastrodia elata89.690
SRR5643659five period of Gastrodia elata20.290
SRR5643660five period of Gastrodia elata22.360
SRR5643661five period of Gastrodia elata13.590
SRR5643662five period of Gastrodia elata17.110
SRR5643663five period of Gastrodia elata27.520
SRR5643664five period of Gastrodia elata11.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.690
SRR6049655Rhizomagastrodiae_C368-T10_good_115.820
SRR6049656Rhizomagastrodiae_C368-T07_good_117.480
SRR6049657Rhizomagastrodiae_C368-T07_good_16.700
SRR6049658Rhizomagastrodiae_C368-T04_good_14.360
SRR6049659Rhizomagastrodiae_C368-T04_good_14.110
SRR6049660Rhizomagastrodiae_C368-T01_good_112.560
SRR6049661Rhizomagastrodiae_C368-T04_good_14.230
SRR6049662Rhizomagastrodiae_C368-T01_good_110.840
SRR6049663Rhizomagastrodiae_C368-T01_good_111.220
SRR6049664Rhizomagastrodiae_C368-T10_good_126.160
SRR6049665Rhizomagastrodiae_C368-T10_good_126.160
SRP279888GastroGastrodia elata tuber 23.25
JuvenJuvenile tuber3.65
Mother_GastroMother tuber of Gastrodia elata 5.67
Mother_JuvenMother tuber of Juvenile 2.00