Detail information of GWHGAAEX006822/evm.TU.scaffold_19.151


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15858.00E-133Protein required for fusion of vesicles in vesicular transport, gamma-SNAP
nrgi|695073202|ref|XP_009383757.1|1.83E-158PREDICTED: gamma-soluble NSF attachment protein [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SPE5|SNAG_ARATH2.00E-140Gamma-soluble NSF attachment protein
trEMBLtr|B9SV66|B9SV66_RICCO2.00E-155Gamma-soluble nsf attachment protein, putative {ECO:0000313|EMBL:EEF32488.1}
TAIRAT4G204108.00E-133gamma-soluble NSF attachment protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002036361623652082+
Transcript Sequence

Network for GWHGAAEX006822

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14938.5SNAP463013.50E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.740
SRR2545915Juvenile tuber60.510
SRP108465SRR5643513five period of Gastrodia elata59.070
SRR5643514five period of Gastrodia elata65.190
SRR5643515five period of Gastrodia elata64.130
SRR5643524five period of Gastrodia elata67.210
SRR5643525five period of Gastrodia elata60.470
SRR5643528five period of Gastrodia elata63.570
SRR5643658five period of Gastrodia elata74.970
SRR5643659five period of Gastrodia elata57.190
SRR5643660five period of Gastrodia elata62.560
SRR5643661five period of Gastrodia elata57.260
SRR5643662five period of Gastrodia elata54.310
SRR5643663five period of Gastrodia elata50.890
SRR5643664five period of Gastrodia elata58.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_152.750
SRR6049655Rhizomagastrodiae_C368-T10_good_176.140
SRR6049656Rhizomagastrodiae_C368-T07_good_155.270
SRR6049657Rhizomagastrodiae_C368-T07_good_153.540
SRR6049658Rhizomagastrodiae_C368-T04_good_157.920
SRR6049659Rhizomagastrodiae_C368-T04_good_151.030
SRR6049660Rhizomagastrodiae_C368-T01_good_149.170
SRR6049661Rhizomagastrodiae_C368-T04_good_151.550
SRR6049662Rhizomagastrodiae_C368-T01_good_150.980
SRR6049663Rhizomagastrodiae_C368-T01_good_147.150
SRR6049664Rhizomagastrodiae_C368-T10_good_163.480
SRR6049665Rhizomagastrodiae_C368-T10_good_163.480
SRP279888GastroGastrodia elata tuber 69.20
JuvenJuvenile tuber101.97
Mother_GastroMother tuber of Gastrodia elata 73.73
Mother_JuvenMother tuber of Juvenile 106.17