Detail information of GWHGAAEX006832/evm.TU.scaffold_19.163


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|22298540|ref|NP_681787.1|3.00E-43histidine triad nucleotide-binding protein [Thermosynechococcus elongatus BP-1]
KOGKOG32751.00E-67Zinc-binding protein of the histidine triad (HIT) family
nrgi|672157067|ref|XP_008798226.1|6.63E-82PREDICTED: 14 kDa zinc-binding protein [Phoenix dactylifera]
Swissprottr|P42856|ZB14_MAIZE9.00E-6514 kDa zinc-binding protein
trEMBLtr|A0A068USQ3|A0A068USQ3_COFCA3.00E-76Coffea canephora
TAIRAT1G311601.00E-67HISTIDINE TRIAD NUCLEOTIDE-BINDING 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002040486194083067+
Transcript Sequence

Network for GWHGAAEX006832

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01230.22HIT821791.40E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.350
SRR2545915Juvenile tuber17.560
SRP108465SRR5643513five period of Gastrodia elata10.340
SRR5643514five period of Gastrodia elata10.930
SRR5643515five period of Gastrodia elata10.060
SRR5643524five period of Gastrodia elata10.130
SRR5643525five period of Gastrodia elata11.430
SRR5643528five period of Gastrodia elata12.600
SRR5643658five period of Gastrodia elata11.670
SRR5643659five period of Gastrodia elata9.410
SRR5643660five period of Gastrodia elata10.190
SRR5643661five period of Gastrodia elata11.280
SRR5643662five period of Gastrodia elata9.150
SRR5643663five period of Gastrodia elata9.050
SRR5643664five period of Gastrodia elata10.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.920
SRR6049655Rhizomagastrodiae_C368-T10_good_18.430
SRR6049656Rhizomagastrodiae_C368-T07_good_17.040
SRR6049657Rhizomagastrodiae_C368-T07_good_19.410
SRR6049658Rhizomagastrodiae_C368-T04_good_19.310
SRR6049659Rhizomagastrodiae_C368-T04_good_16.570
SRR6049660Rhizomagastrodiae_C368-T01_good_17.580
SRR6049661Rhizomagastrodiae_C368-T04_good_16.920
SRR6049662Rhizomagastrodiae_C368-T01_good_111.210
SRR6049663Rhizomagastrodiae_C368-T01_good_18.650
SRR6049664Rhizomagastrodiae_C368-T10_good_111.670
SRR6049665Rhizomagastrodiae_C368-T10_good_111.670
SRP279888GastroGastrodia elata tuber 10.84
JuvenJuvenile tuber8.33
Mother_GastroMother tuber of Gastrodia elata 7.93
Mother_JuvenMother tuber of Juvenile 5.27