Gene detail

Detail information of GWHGAAEX006833/evm.TU.scaffold_19.164

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|543961862\|ref\|YP_008544897.1\|	5.00E-97	K+ transporter [Sulfuricella denitrificans skB26]
nr	gi\|672157048\|ref\|XP_008798216.1\|	0	PREDICTED: probable potassium transporter 11 [Phoenix dactylifera]
Swissprot	tr\|Q8VXB1\|HAK12_ORYSJ	0	Putative potassium transporter 12
trEMBL	tr\|I1J1S8\|I1J1S8_BRADI	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}
TAIR	AT2G35060	0	K+ uptake permease 11

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000020	4103470	4110005	+

Transcript Sequence
>GWHTAAEX006833 TGAGATCCCTTCCCCGCCTCGCCCACCCCACGCTGCCTTCTCCATTTAGAGCGGAACAGCTTTTTCTATCAGCTTTAAAAATGTCTTTTGGCTGAGACAAAAACCTTCTGAGAGAGAAAACTGTTCTTTCTTAATGTTAACACAGCTGATCTCTCACGGAGTGCTTTGCGGAGCAATTCGAAGAGGTTCTCAGCTATTTCTGTATTTTGATTTCTCGACTGAACTCGGTTCGATTTGCTTTTACGGATTAGGGCTACGTTTGGGGACGATTTGAGGTTTTTGATGGCGTCGATTTCGGAGGAGGAAGATGGCGGGAAGGGAAGAATGTGGGACTTGGATCAGAAGATCGATCAGCCTATCGACGAAGAGGCGGCTGGGAGGCTCAAAAATCTGTACAAGGATAAGGAGTTCTCCTTCTTGCTGCTTCTGCGGCTTGCGTTCCAGAGCCTTGGCATAGTGTTCGGAGATTTGGGCACATCCCCTCTGTATGTTTTCTACAATACATTTTCTCATGGGATAAGTGATCCCGAAGATGTCATCGGAGCTCTTTCTCTGATCATATACTCTCTAACTCTGGTTCCGCTAATCAAATACGTTTTCGTGGTCTTGCGAGCTAATGACAATGGCCAAGGTGGAACTTTCGCGTTATACTCGTTGCTCTGTAGGCATGCTCAAATTAAGACGATTCCCAATCAGCACAGAACTGACGAGGAGCTGACAACATACAGCCGCCATCTTTACGATGAGAAGTCTCTGGCAATGAAAGTTAAGAGGTGGTTGGAGGCGCATTCCTTTAAGAAAAATGCTATTCTCATTCTTGTTCTTTTCGCAACTTGCATGACTATTGGCGATGGTATTCTCACCCCAGCTATCTCCGTTCTGTCAGCATCCGGTGGAATCAAAGTCAACAATCCAGAAATAGACAAAGGCGTGGTAATATTGGTGGCAGTAATCATATTGGTCGGTCTGTTTAGCGTGCAGCATTATGGCACAGACAAAGTTGGCTGGTTATTTGCTCCTATTGTGTTGCTATGGTTTCTGCTGATAGGAGCCATAGGCGCCTTCAATATATGGAAATACGGCAGTTCGGTCTTGAAAGCCTTCAATCCTGCTTATATACTTAGATATTTCAAAGGCGGCCGCACGAACTGGACTTCCCTGGGAGGGATCATGCTCAGCATCACAGGAACAGAAGCATTATTTGCCGACCTATGTAATTTTCCGGTCCTAGCAATTCAGGTTGCTTTCACGCTTGTTGTGTTCCCGTGCCTCCTGCTGGCGTATTCCGGGCAAGCGGCGTACATCATGCAGCACAGGGATCACGTCGTCGACGCATTCTACCGATCGATCCCAGGAGCCATGTACTGGCCGATGTTCATTGTCGCAACAGCTGCAGCTATCGTTGCCAGCCAAGCCACCATCTCGGCAACGTTCTCTATAATTAAGCAGGCGGCCGCCCTCGGATGCTTCCCCAGGGTCAAGATTGTCCACACATCAAAGAACTTCCTCGGCCAGATTTACATCCCAGACATCAATTGGATTCTCCTGCTTCTCTGCGTAGCCGTTACTGCCGGATTTGAAAATCAAAGCCAGATTGGCAATGCTTACGGAACTGCGGTGGTGCTTGTTATGCTGGTGACGACCTTGCTGATGGTCCCTGTGATGCTCCTGGTATGGCGCAGCCATGTTGTCATCGTCTTCCTCTTCGCCTCTCTCTCCCTCCTCGTAGAGCTCACCTACTTCTCTGCAGTCCTCTTCAAGGTGAACCAAGGCGGATGGGTGCCGCTGGTCATCGCCACCGCCGTCCTCTTGGTCATGTACGTCTGGCATTACACCACGGTGAAGCGCTACGAGTTCGAGATGCACTCCAAGGTATCGATGGCTTGGATCCTCGGCCTTGGCCCCAGCCTCGGTCTTGTCCGCGTTCCCGGCATCGGCTTCCTCTACACCGAGCTGCCCACCGGAGTCCCCCACATATTCTCGCACTTCATCACCAACCTCCCGGCTATCCACTCCATTGTCGTCTTCGTCTGCGTGAAGTACCTCCCCGTCTACATTGTCCCGCCGGAGGAGCGCTTTCTAGTCAAGCGGATCGGCCCCAAGGAATTTCGCATGTTCCGTTGCGTCGCCAGGTACGGATACAAGGATCTTCACCAAAAAGATGATGACTTCGAGAAGATGATATTCGACTCCATCTCCAGTTTCATCCGCCTCGAGACAATGATGGAAGGCTACACCGACTCGGAGAATGGCGGTGGACACGTAGTCGATCTTCTCGATTACGATGACGCTCTATGCTCCGAGACGGAGGCATCGCAAAATTCGTCAAGGGACTTGATCGTGCCCGCAGAATCGCTGTCGGTGGCGACACGACTCCGAAGGCAAATTGTTGCGGGCAGCATTCATGCGAGCTGGACCGCGAGCGAAGAGTATGATTTCTTGAAAGAGAGCAAGGATGCTGGGATGGTGCATATTTTGGGCAACACGATAGTGAGGGCAAGAAGAGATTCAAACCCTGTTAAGAAGTTTGCTGTCGATTACATTTATGCATTCCTAAAGAAAGTTTGCAGGGAGAACAGCATGATGCTGAATCTCCCTCATGAGAGTTTGTTGAGCGTTGGTCAGGTATTCTACATATAATTTAGTTTGCCTATTTAAAAGTGGAAGATGTTATATATTGTTGATTTGTTTTTTCATAGTTTTATTAATTAATTAGAAATATATTAAACCTATT

Network for GWHGAAEX006833

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02705.15	K_trans	52	622	2.40E-182

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071805	Biological Process	potassium ion transmembrane transport
GO:0015079	Molecular Function	potassium ion transmembrane transporter activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.730
SRP064423	SRR2545915	Juvenile tuber	15.930
SRP108465	SRR5643513	five period of Gastrodia elata	48.530
	SRR5643514	five period of Gastrodia elata	34.280
	SRR5643515	five period of Gastrodia elata	24.590
	SRR5643524	five period of Gastrodia elata	23.950
	SRR5643525	five period of Gastrodia elata	11.940
	SRR5643528	five period of Gastrodia elata	45.430
	SRR5643658	five period of Gastrodia elata	16.980
	SRR5643659	five period of Gastrodia elata	15.130
	SRR5643660	five period of Gastrodia elata	23.260
	SRR5643661	five period of Gastrodia elata	11.850
	SRR5643662	five period of Gastrodia elata	16.560
	SRR5643663	five period of Gastrodia elata	25.710
	SRR5643664	five period of Gastrodia elata	26.370
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	44.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	52.690
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	30.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	61.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	62.690
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	92.650
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	41.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	54.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	25.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	40.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	40.700
SRP279888	Gastro	Gastrodia elata tuber	40.74
	Juven	Juvenile tuber	14.42
	Mother_Gastro	Mother tuber of Gastrodia elata	247.67
	Mother_Juven	Mother tuber of Juvenile	188.52