Detail information of GWHGAAEX006851/evm.TU.scaffold_19.190


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31516.00E-13726S proteasome regulatory complex, subunit RPN12/PSMD8
nrgi|743768092|ref|XP_010914322.1|2.44E-163PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Elaeis guineensis]
Swissprottr|Q9SGW3|PSD8A_ARATH2.00E-13726S proteasome non-ATPase regulatory subunit 8 homolog A
trEMBLtr|M0RRX2|M0RRX2_MUSAM1.00E-160Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P13420_001}
TAIRAT1G645206.00E-137regulatory particle non-ATPase 12A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002047324424742049+
Transcript Sequence

Network for GWHGAAEX006851

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10075.8CSN8_PSD8_EIF3K1062423.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03031PSMD8, RPN12 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms100.170
SRR2545915Juvenile tuber113.860
SRP108465SRR5643513five period of Gastrodia elata126.880
SRR5643514five period of Gastrodia elata134.750
SRR5643515five period of Gastrodia elata122.240
SRR5643524five period of Gastrodia elata140.660
SRR5643525five period of Gastrodia elata107.760
SRR5643528five period of Gastrodia elata133.060
SRR5643658five period of Gastrodia elata88.650
SRR5643659five period of Gastrodia elata111.950
SRR5643660five period of Gastrodia elata102.020
SRR5643661five period of Gastrodia elata104.510
SRR5643662five period of Gastrodia elata87.760
SRR5643663five period of Gastrodia elata91.100
SRR5643664five period of Gastrodia elata79.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1100.590
SRR6049655Rhizomagastrodiae_C368-T10_good_1171.410
SRR6049656Rhizomagastrodiae_C368-T07_good_195.010
SRR6049657Rhizomagastrodiae_C368-T07_good_191.270
SRR6049658Rhizomagastrodiae_C368-T04_good_191.480
SRR6049659Rhizomagastrodiae_C368-T04_good_182.330
SRR6049660Rhizomagastrodiae_C368-T01_good_183.550
SRR6049661Rhizomagastrodiae_C368-T04_good_179.890
SRR6049662Rhizomagastrodiae_C368-T01_good_1107.320
SRR6049663Rhizomagastrodiae_C368-T01_good_187.800
SRR6049664Rhizomagastrodiae_C368-T10_good_1132.360
SRR6049665Rhizomagastrodiae_C368-T10_good_1132.360
SRP279888GastroGastrodia elata tuber 94.92
JuvenJuvenile tuber164.00
Mother_GastroMother tuber of Gastrodia elata 118.81
Mother_JuvenMother tuber of Juvenile 159.73