Detail information of GWHGAAEX006857/evm.TU.scaffold_19.197
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|430746152|ref|YP_007205281.1| | 3.00E-65 | 3'(2'),5'-bisphosphate nucleotidase, HAL2 family [Singulisphaera acidiphila DSM 18658] |
| KOG | KOG1528 | 2.00E-170 | Salt-sensitive 3'-phosphoadenosine-5'-phosphatase HAL2/SAL1 |
| nr | gi|743785715|ref|XP_010921982.1| | 0 | PREDICTED: PAP-specific phosphatase HAL2-like [Elaeis guineensis] |
| Swissprot | tr|Q38945|DPNPH_ARATH | 5.00E-171 | PAP-specific phosphatase HAL2-like |
| trEMBL | tr|M0TNF5|M0TNF5_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P07520_001} |
| TAIR | AT5G54390 | 2.00E-170 | HAL2-like |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000020 | 4943424 | 4946092 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006857
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00459.24 | Inositol_P | 73 | 406 | 1.30E-55 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01082 | cysQ, MET22, BPNT1 | Metabolic pathways | map01100 |
| Microbial metabolism in diverse environments | map01120 | ||
| Sulfur metabolism | map00920 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046854 | Biological Process | phosphatidylinositol phosphorylation |
| GO:0006790 | Biological Process | sulfur compound metabolic process |
| GO:0008441 | Molecular Function | 3'(2'),5'-bisphosphate nucleotidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 22.740 |
| SRR2545915 | Juvenile tuber | 18.880 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 52.960 |
| SRR5643514 | five period of Gastrodia elata | 78.080 | |
| SRR5643515 | five period of Gastrodia elata | 66.690 | |
| SRR5643524 | five period of Gastrodia elata | 78.010 | |
| SRR5643525 | five period of Gastrodia elata | 47.480 | |
| SRR5643528 | five period of Gastrodia elata | 59.120 | |
| SRR5643658 | five period of Gastrodia elata | 56.280 | |
| SRR5643659 | five period of Gastrodia elata | 25.110 | |
| SRR5643660 | five period of Gastrodia elata | 31.220 | |
| SRR5643661 | five period of Gastrodia elata | 26.520 | |
| SRR5643662 | five period of Gastrodia elata | 35.230 | |
| SRR5643663 | five period of Gastrodia elata | 32.040 | |
| SRR5643664 | five period of Gastrodia elata | 30.110 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.180 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.410 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 31.960 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 36.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 31.280 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 35.090 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 42.130 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 26.520 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 45.950 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 53.400 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 38.820 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 38.820 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 35.12 |
| Juven | Juvenile tuber | 59.74 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 120.98 | |
| Mother_Juven | Mother tuber of Juvenile | 89.18 |