Detail information of GWHGAAEX006875/evm.TU.scaffold_19.224


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26968.00E-140Histone acetyltransferase type b catalytic subunit
nrgi|743756050|ref|XP_010914824.1|0PREDICTED: probable histone acetyltransferase type B catalytic subunit [Elaeis guineensis]
Swissprottr|Q6ES10|HAT1_ORYSJ1.00E-150Probable histone acetyltransferase type B catalytic subunit
trEMBLtr|M0TXW0|M0TXW0_MUSAM1.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P06010_001}
TAIRAT5G567408.00E-140histone acetyltransferase of the GNAT family 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002062380906259964+
Transcript Sequence

Network for GWHGAAEX006875

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10394.8Hat1_N291972.50E-20
PF00583.24Acetyltransf_12112867.80E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006325Biological Processchromatin organization
GO:0008080Molecular FunctionN-acetyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.660
SRR2545915Juvenile tuber35.780
SRP108465SRR5643513five period of Gastrodia elata30.350
SRR5643514five period of Gastrodia elata32.390
SRR5643515five period of Gastrodia elata29.190
SRR5643524five period of Gastrodia elata32.330
SRR5643525five period of Gastrodia elata24.590
SRR5643528five period of Gastrodia elata26.230
SRR5643658five period of Gastrodia elata27.840
SRR5643659five period of Gastrodia elata39.610
SRR5643660five period of Gastrodia elata44.120
SRR5643661five period of Gastrodia elata42.000
SRR5643662five period of Gastrodia elata41.490
SRR5643663five period of Gastrodia elata38.820
SRR5643664five period of Gastrodia elata37.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.700
SRR6049655Rhizomagastrodiae_C368-T10_good_130.620
SRR6049656Rhizomagastrodiae_C368-T07_good_138.020
SRR6049657Rhizomagastrodiae_C368-T07_good_130.840
SRR6049658Rhizomagastrodiae_C368-T04_good_136.170
SRR6049659Rhizomagastrodiae_C368-T04_good_131.440
SRR6049660Rhizomagastrodiae_C368-T01_good_134.870
SRR6049661Rhizomagastrodiae_C368-T04_good_133.340
SRR6049662Rhizomagastrodiae_C368-T01_good_141.980
SRR6049663Rhizomagastrodiae_C368-T01_good_139.070
SRR6049664Rhizomagastrodiae_C368-T10_good_139.190
SRR6049665Rhizomagastrodiae_C368-T10_good_139.190
SRP279888GastroGastrodia elata tuber 50.89
JuvenJuvenile tuber45.50
Mother_GastroMother tuber of Gastrodia elata 34.87
Mother_JuvenMother tuber of Juvenile 32.58