Detail information of GWHGAAEX006877/evm.TU.scaffold_19.228


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00481.00E-66Transcription factor, Myb superfamily
nrgi|743795453|ref|XP_010924471.1|2.52E-72PREDICTED: transcription factor RAX2-like [Elaeis guineensis]
Swissprottr|Q9M2Y9|RAX3_ARATH3.00E-67Transcription factor RAX3
trEMBLtr|C5XLY8|C5XLY8_SORBI4.00E-71Putative uncharacterized protein Sb03g003120 {ECO:0000313|EMBL:EES00143.1}
TAIRAT3G496901.00E-66myb domain protein 84

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002063365636337239-
Transcript Sequence

Network for GWHGAAEX006877

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14621.80E-14
PF00249.30Myb_DNA-binding691113.40E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.550
SRR5643514five period of Gastrodia elata1.390
SRR5643515five period of Gastrodia elata0.170
SRR5643524five period of Gastrodia elata0.300
SRR5643525five period of Gastrodia elata0.190
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.330
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.140
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.15
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00