Detail information of GWHGAAEX006879/evm.TU.scaffold_19.232
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|427711233|ref|YP_007059857.1| | 3.00E-101 | Kef-type K+ transport system membrane protein [Synechococcus sp. PCC 6312] |
| KOG | KOG1650 | 0 | Predicted K+/H+-antiporter |
| nr | gi|695068533|ref|XP_009381213.1| | 0 | PREDICTED: K(+) efflux antiporter 4-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9ZUN3|KEA4_ARATH | 0 | K(+) efflux antiporter 4 |
| trEMBL | tr|V7CSJ4|V7CSJ4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW32230.1} |
| TAIR | AT2G19600 | 0 | K+ efflux antiporter 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000020 | 6477905 | 6551879 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006879
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00999.20 | Na_H_Exchanger | 164 | 533 | 9.10E-74 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006812 | Biological Process | cation transport |
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0015299 | Molecular Function | solute:proton antiporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.570 |
| SRR2545915 | Juvenile tuber | 22.510 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 26.570 |
| SRR5643514 | five period of Gastrodia elata | 24.760 | |
| SRR5643515 | five period of Gastrodia elata | 23.510 | |
| SRR5643524 | five period of Gastrodia elata | 25.630 | |
| SRR5643525 | five period of Gastrodia elata | 29.370 | |
| SRR5643528 | five period of Gastrodia elata | 27.200 | |
| SRR5643658 | five period of Gastrodia elata | 41.070 | |
| SRR5643659 | five period of Gastrodia elata | 18.580 | |
| SRR5643660 | five period of Gastrodia elata | 14.770 | |
| SRR5643661 | five period of Gastrodia elata | 16.260 | |
| SRR5643662 | five period of Gastrodia elata | 14.880 | |
| SRR5643663 | five period of Gastrodia elata | 19.140 | |
| SRR5643664 | five period of Gastrodia elata | 14.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 24.600 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 24.640 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 22.210 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.060 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.770 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 21.690 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.230 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 22.600 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.090 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 23.690 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.590 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.590 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.81 |
| Juven | Juvenile tuber | 28.18 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.99 | |
| Mother_Juven | Mother tuber of Juvenile | 28.07 |