Detail information of GWHGAAEX006881/evm.TU.scaffold_19.236


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695016610|ref|XP_009395219.1|2.19E-48PREDICTED: protodermal factor 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9S728|PDF1_ARATH5.00E-31Protodermal factor 1 (Precursor)
trEMBLtr|M1AD13|M1AD13_SOLTU1.00E-37Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400020126}
TAIRAT2G428402.00E-30protodermal factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002067145246715920+
Transcript Sequence

Network for GWHGAAEX006881

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.360
SRR2545915Juvenile tuber25.660
SRP108465SRR5643513five period of Gastrodia elata7.130
SRR5643514five period of Gastrodia elata5.860
SRR5643515five period of Gastrodia elata2.310
SRR5643524five period of Gastrodia elata3.520
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.470
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.190
SRR5643660five period of Gastrodia elata0.410
SRR5643661five period of Gastrodia elata0.210
SRR5643662five period of Gastrodia elata0.350
SRR5643663five period of Gastrodia elata0.110
SRR5643664five period of Gastrodia elata0.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.270
SRR6049655Rhizomagastrodiae_C368-T10_good_111.060
SRR6049656Rhizomagastrodiae_C368-T07_good_16.610
SRR6049657Rhizomagastrodiae_C368-T07_good_16.550
SRR6049658Rhizomagastrodiae_C368-T04_good_13.110
SRR6049659Rhizomagastrodiae_C368-T04_good_12.100
SRR6049660Rhizomagastrodiae_C368-T01_good_13.860
SRR6049661Rhizomagastrodiae_C368-T04_good_112.690
SRR6049662Rhizomagastrodiae_C368-T01_good_112.760
SRR6049663Rhizomagastrodiae_C368-T01_good_13.670
SRR6049664Rhizomagastrodiae_C368-T10_good_15.180
SRR6049665Rhizomagastrodiae_C368-T10_good_15.180
SRP279888GastroGastrodia elata tuber 0.05
JuvenJuvenile tuber0.20
Mother_GastroMother tuber of Gastrodia elata 0.02
Mother_JuvenMother tuber of Juvenile 0.07