Detail information of GWHGAAEX006891/evm.TU.scaffold_19.252


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743754637|ref|XP_010937402.1|0PREDICTED: uncharacterized protein LOC105055445 isoform X2 [Elaeis guineensis]
trEMBLtr|M0TCP1|M0TCP1_MUSAM6.00E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P34480_001}
TAIRAT1G800001.00E-73CASC3/Barentsz eIF4AIII binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002071054347135986-
Transcript Sequence

Network for GWHGAAEX006891

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09405.9Btz1352231.90E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.920
SRR2545915Juvenile tuber27.990
SRP108465SRR5643513five period of Gastrodia elata30.500
SRR5643514five period of Gastrodia elata27.440
SRR5643515five period of Gastrodia elata30.260
SRR5643524five period of Gastrodia elata29.820
SRR5643525five period of Gastrodia elata44.290
SRR5643528five period of Gastrodia elata41.480
SRR5643658five period of Gastrodia elata52.080
SRR5643659five period of Gastrodia elata34.600
SRR5643660five period of Gastrodia elata35.410
SRR5643661five period of Gastrodia elata33.480
SRR5643662five period of Gastrodia elata32.540
SRR5643663five period of Gastrodia elata29.170
SRR5643664five period of Gastrodia elata33.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.960
SRR6049655Rhizomagastrodiae_C368-T10_good_123.930
SRR6049656Rhizomagastrodiae_C368-T07_good_122.240
SRR6049657Rhizomagastrodiae_C368-T07_good_128.760
SRR6049658Rhizomagastrodiae_C368-T04_good_128.840
SRR6049659Rhizomagastrodiae_C368-T04_good_133.020
SRR6049660Rhizomagastrodiae_C368-T01_good_133.700
SRR6049661Rhizomagastrodiae_C368-T04_good_128.720
SRR6049662Rhizomagastrodiae_C368-T01_good_124.010
SRR6049663Rhizomagastrodiae_C368-T01_good_127.730
SRR6049664Rhizomagastrodiae_C368-T10_good_124.930
SRR6049665Rhizomagastrodiae_C368-T10_good_124.930
SRP279888GastroGastrodia elata tuber 26.39
JuvenJuvenile tuber30.18
Mother_GastroMother tuber of Gastrodia elata 28.91
Mother_JuvenMother tuber of Juvenile 30.46