Detail information of GWHGAAEX006894/evm.TU.scaffold_19.257


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07022.00E-79Predicted GTPase-activating protein
nrgi|743754627|ref|XP_010933331.1|0PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2 [Elaeis guineensis]
Swissprottr|Q8RXE7|AGD14_ARATH1.00E-66Probable ADP-ribosylation factor GTPase-activating protein AGD14
trEMBLtr|M0TFW8|M0TFW8_MUSAM1.00E-156Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P08800_001}
TAIRAT4G133502.00E-79NSP (nuclear shuttle protein)-interacting GTPase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002073288237356470+
Transcript Sequence

Network for GWHGAAEX006894

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01412.17ArfGap131231.30E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005096Molecular FunctionGTPase activator activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms222.860
SRR2545915Juvenile tuber176.070
SRP108465SRR5643513five period of Gastrodia elata82.460
SRR5643514five period of Gastrodia elata61.990
SRR5643515five period of Gastrodia elata72.010
SRR5643524five period of Gastrodia elata62.740
SRR5643525five period of Gastrodia elata111.540
SRR5643528five period of Gastrodia elata86.090
SRR5643658five period of Gastrodia elata98.860
SRR5643659five period of Gastrodia elata124.520
SRR5643660five period of Gastrodia elata137.150
SRR5643661five period of Gastrodia elata123.180
SRR5643662five period of Gastrodia elata128.930
SRR5643663five period of Gastrodia elata147.100
SRR5643664five period of Gastrodia elata152.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1119.290
SRR6049655Rhizomagastrodiae_C368-T10_good_1105.870
SRR6049656Rhizomagastrodiae_C368-T07_good_1100.590
SRR6049657Rhizomagastrodiae_C368-T07_good_1158.000
SRR6049658Rhizomagastrodiae_C368-T04_good_1131.580
SRR6049659Rhizomagastrodiae_C368-T04_good_1165.070
SRR6049660Rhizomagastrodiae_C368-T01_good_1133.690
SRR6049661Rhizomagastrodiae_C368-T04_good_1135.890
SRR6049662Rhizomagastrodiae_C368-T01_good_176.530
SRR6049663Rhizomagastrodiae_C368-T01_good_187.240
SRR6049664Rhizomagastrodiae_C368-T10_good_169.130
SRR6049665Rhizomagastrodiae_C368-T10_good_169.130
SRP279888GastroGastrodia elata tuber 145.23
JuvenJuvenile tuber142.83
Mother_GastroMother tuber of Gastrodia elata 64.88
Mother_JuvenMother tuber of Juvenile 85.83