Detail information of GWHGAAEX006909/evm.TU.scaffold_190.8
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3440 | 2.00E-57 | Ubiquinol cytochrome c reductase, subunit QCR7 |
| nr | gi|747070227|ref|XP_011081925.1| | 2.24E-62 | PREDICTED: cytochrome b-c1 complex subunit 7 [Sesamum indicum] |
| Swissprot | tr|P48502|QCR7_SOLTU | 1.00E-59 | Cytochrome b-c1 complex subunit 7 |
| trEMBL | tr|K4AGM5|K4AGM5_SETIT | 3.00E-61 | Cytochrome b-c1 complex subunit 7 {ECO:0000256|PIRNR:PIRNR000022} |
| TAIR | AT5G25450 | 2.00E-57 | Cytochrome bd ubiquinol oxidase, 14kDa subunit |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000186 | 523134 | 541744 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006909
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02271.15 | UCR_14kD | 15 | 111 | 9.20E-27 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00417 | QCR7, UQCRB | Metabolic pathways | map01100 |
| Oxidative phosphorylation | map00190 | ||
| Cardiac muscle contraction | map04260 | ||
| Thermogenesis | map04714 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006122 | Biological Process | mitochondrial electron transport, ubiquinol to cytochrome c |
| GO:0005750 | Cellular Component | mitochondrial respiratory chain complex III |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 85.950 |
| SRR2545915 | Juvenile tuber | 103.330 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 208.860 |
| SRR5643514 | five period of Gastrodia elata | 318.540 | |
| SRR5643515 | five period of Gastrodia elata | 244.470 | |
| SRR5643524 | five period of Gastrodia elata | 324.050 | |
| SRR5643525 | five period of Gastrodia elata | 164.790 | |
| SRR5643528 | five period of Gastrodia elata | 199.820 | |
| SRR5643658 | five period of Gastrodia elata | 161.850 | |
| SRR5643659 | five period of Gastrodia elata | 156.620 | |
| SRR5643660 | five period of Gastrodia elata | 151.310 | |
| SRR5643661 | five period of Gastrodia elata | 169.250 | |
| SRR5643662 | five period of Gastrodia elata | 149.910 | |
| SRR5643663 | five period of Gastrodia elata | 153.920 | |
| SRR5643664 | five period of Gastrodia elata | 152.990 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 169.230 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 364.730 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 207.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 133.380 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 128.890 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 117.730 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 137.690 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 134.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 222.940 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 194.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 316.420 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 316.420 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 209.21 |
| Juven | Juvenile tuber | 161.17 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 147.15 | |
| Mother_Juven | Mother tuber of Juvenile | 145.71 |