Detail information of GWHGAAEX006912/evm.TU.scaffold_190.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|357149035|ref|XP_003574978.1|1.41E-51PREDICTED: uncharacterized protein LOC100841147 [Brachypodium distachyon]
trEMBLtr|I1I9Q3|I1I9Q3_BRADI5.00E-52Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G43520.1}
TAIRAT5G523708.00E-38Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000186822567836316+
Transcript Sequence

Network for GWHGAAEX006912

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16053.4MRP-S34441212.80E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005739Cellular Componentmitochondrion

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.980
SRR2545915Juvenile tuber43.850
SRP108465SRR5643513five period of Gastrodia elata38.320
SRR5643514five period of Gastrodia elata39.760
SRR5643515five period of Gastrodia elata40.230
SRR5643524five period of Gastrodia elata38.550
SRR5643525five period of Gastrodia elata42.800
SRR5643528five period of Gastrodia elata45.460
SRR5643658five period of Gastrodia elata40.660
SRR5643659five period of Gastrodia elata52.500
SRR5643660five period of Gastrodia elata55.120
SRR5643661five period of Gastrodia elata49.100
SRR5643662five period of Gastrodia elata44.750
SRR5643663five period of Gastrodia elata45.160
SRR5643664five period of Gastrodia elata38.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.110
SRR6049655Rhizomagastrodiae_C368-T10_good_135.820
SRR6049656Rhizomagastrodiae_C368-T07_good_129.350
SRR6049657Rhizomagastrodiae_C368-T07_good_127.570
SRR6049658Rhizomagastrodiae_C368-T04_good_123.150
SRR6049659Rhizomagastrodiae_C368-T04_good_121.300
SRR6049660Rhizomagastrodiae_C368-T01_good_127.360
SRR6049661Rhizomagastrodiae_C368-T04_good_121.990
SRR6049662Rhizomagastrodiae_C368-T01_good_133.490
SRR6049663Rhizomagastrodiae_C368-T01_good_127.370
SRR6049664Rhizomagastrodiae_C368-T10_good_138.190
SRR6049665Rhizomagastrodiae_C368-T10_good_138.190
SRP279888GastroGastrodia elata tuber 74.34
JuvenJuvenile tuber64.50
Mother_GastroMother tuber of Gastrodia elata 41.16
Mother_JuvenMother tuber of Juvenile 47.50