Detail information of GWHGAAEX006932/evm.TU.scaffold_191.10_evm.TU.scaffold_191.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430747671|ref|YP_007206800.1|2.00E-24protein kinase family protein [Singulisphaera acidiphila DSM 18658]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|720017331|ref|XP_010261434.1|0PREDICTED: calcium-dependent protein kinase 3-like [Nelumbo nucifera]
Swissprottr|Q42479|CDPK3_ARATH0Calcium-dependent protein kinase 3
trEMBLtr|B9RCK2|B9RCK2_RICCO0Calcium-dependent protein kinase, putative {ECO:0000313|EMBL:EEF51273.1}
TAIRAT4G236500calcium-dependent protein kinase 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000194157864194135-
Transcript Sequence

Network for GWHGAAEX006932

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase653206.60E-72
PF13499.5EF-hand_73704286.60E-10
PF13499.5EF-hand_74385007.60E-11
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0005509Molecular Functioncalcium ion binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.810
SRR2545915Juvenile tuber12.660
SRP108465SRR5643513five period of Gastrodia elata14.060
SRR5643514five period of Gastrodia elata15.580
SRR5643515five period of Gastrodia elata14.000
SRR5643524five period of Gastrodia elata17.240
SRR5643525five period of Gastrodia elata17.640
SRR5643528five period of Gastrodia elata16.780
SRR5643658five period of Gastrodia elata16.710
SRR5643659five period of Gastrodia elata14.910
SRR5643660five period of Gastrodia elata14.160
SRR5643661five period of Gastrodia elata15.460
SRR5643662five period of Gastrodia elata15.380
SRR5643663five period of Gastrodia elata14.940
SRR5643664five period of Gastrodia elata14.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.330
SRR6049655Rhizomagastrodiae_C368-T10_good_110.490
SRR6049656Rhizomagastrodiae_C368-T07_good_114.950
SRR6049657Rhizomagastrodiae_C368-T07_good_115.160
SRR6049658Rhizomagastrodiae_C368-T04_good_115.820
SRR6049659Rhizomagastrodiae_C368-T04_good_116.380
SRR6049660Rhizomagastrodiae_C368-T01_good_116.000
SRR6049661Rhizomagastrodiae_C368-T04_good_115.140
SRR6049662Rhizomagastrodiae_C368-T01_good_118.470
SRR6049663Rhizomagastrodiae_C368-T01_good_115.920
SRR6049664Rhizomagastrodiae_C368-T10_good_118.840
SRR6049665Rhizomagastrodiae_C368-T10_good_118.840
SRP279888GastroGastrodia elata tuber 13.96
JuvenJuvenile tuber19.52
Mother_GastroMother tuber of Gastrodia elata 22.67
Mother_JuvenMother tuber of Juvenile 23.17