Gene detail

Detail information of GWHGAAEX006933/evm.TU.scaffold_191.12

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672158871\|ref\|XP_008799181.1\|	5.00E-139	PREDICTED: uncharacterized protein LOC103713907 [Phoenix dactylifera]
trEMBL	tr\|M0RTF5\|M0RTF5_MUSAM	2.00E-124	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P18750_001}
TAIR	AT1G22030	9.00E-93	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000194	295932	297774	+

Transcript Sequence
>GWHTAAEX006933 TGAAAATAAAAAAAGGCAAGCCACTTTGTTCAAAAATCGCTGAGGAAGGAGAAGATGGCGCACTGAATTGATCTCTTAATAATTTTTCAATTTTCTTTCCTCCCTTCTTGTCTCTCTCTATCTCTCCAAATTTCCCTTTCTCTTTCTCCACCACTCAACAATGGCAATGGCAGATTCCCAATCATTATATCCCTTCCAAAGGAAACAGCCATCATTACCTTCCCCTCAAATAAAACTTCTCATCTTAGAAAGCGGAGCGCCCACCTCGCTCAATAAATTCTCCTTAATTCCGCTCCAAAAACAAAAACCATCTTCAATCATCAGTTTTTCAGCCTCCCTGTTCTTCCCCAAATGAAGCCTTCTTCAAGCTCCGTCAATGGCTTCTACTCCCTCCTATCTCACGGCCTGGACGACCTGGAGCGCTGCTTCTTATCTCACCCTTTCATGTCAATTCAGTTCCTGCAGCGCGCCATGTCTCTCCTCCGCTCCCTCCACTCTCACCTCACCCATCTTGTCCATAAGCTCCACCTACCTGGAGGCGACAAGTGGCTGGATGAATACATGGACGAGAGTTCCCGCCTCTGGGAAGCTTCTCAAATCCTCAAGCTCGGCCTCTCCGCCATGGAGTCTTACTGCGCCGCCGCCCCCTCAGACCTTATCTCTTCCCTCGACAATTGGCGCATCTCCCCCTCTCCCCACCTCCACCGCCAGGTGATCCGTGCGATTTCGAGATCGAAGAGAGAAGCAGCGGGGCTTGAAGAAGAAAACAGGGTTTTGGTGCAGAACAGAGCGCGCCCTCTGGCTCTGCAGCTGGACGAGAGGGTTCTGTCGATGGAGACGAAGCTGAACGGATTCAATGGATTCAGGGGAGTGCTGTACGCAATGAGGAATGCGAGCTCCTTGATCCTGATCATGCTGCTCTGGGGATCCGTTTCTTACTGGCCGGATCCAAGCTCACGAGGGCTGGGCAGGCTGGAGAGCCAGAGGGGAGAGAGCAGCGCCCTGTTCTATGGCTCAGGGTTCATGGTCTTCCTGGCCAGGCTGCAGCAGAGGCTGGTGGGGGAGATGGAGGGGATGGAATCCAGGCCTGGGATTCTGATGCACGAGCTCAGGCAGGCCATGGCTGCGCAAGAGGAGCTCAGGGAGGAGATGGACGGAGCAGGGGAGGCCTGGGAGAGAGCCGAGAGGCTCAAGGATTGGTTTGGGCTGCTCAGAAGCGGGACGGAGAGTCTTGTGGGGCAGCTGGATGATTTCTTCGATGAGATAGCTGAGGGGAGGAAGCGATTGTTGGATCTCTGCAGTCATGGTTAGTGTTTTTTTGAGTGAAAAAGGTCGCATCTTTGTTGAAGAAATGGAACAGGGGGGGATTTAGGCGTTGTAAGTGGCCGACCGATCTGTATGTCTAGTTTTGTATGCCTTTTTGTTCTTCTTCTTTTTCTTCTTGGCTATGCGCAGTGTTATAATAGTGTTGGAAGGAGGAAGAATGGGCAGAAAACAAAAATGGAGGCTTTTAGGTGGGGATATTTTCGGCTGTAACGCCTCTTTTTGGTGTAAGAGTGAGAGAGAACCTTCTGCTGCGCATAGGCTTTTTTGTTTGTCGCAGGGAAGACAACAACTGGAGCCTCTAATAAATAAATCAAAATTTTGGTCTAAGAAAAAACAAATTGTAATTAAAAATCTACAATATAAATTATATTTTCCAAATAGAACTATTTTATTTCGCTTTTTATAGGGAAAATAAAAGCCGGAAATTCTCATGACCTATTTTTGGTTAAATAAAAA

Network for GWHGAAEX006933

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.610
SRP064423	SRR2545915	Juvenile tuber	1.620
SRP108465	SRR5643513	five period of Gastrodia elata	1.350
	SRR5643514	five period of Gastrodia elata	5.130
	SRR5643515	five period of Gastrodia elata	1.550
	SRR5643524	five period of Gastrodia elata	3.350
	SRR5643525	five period of Gastrodia elata	9.460
	SRR5643528	five period of Gastrodia elata	4.660
	SRR5643658	five period of Gastrodia elata	32.250
	SRR5643659	five period of Gastrodia elata	7.790
	SRR5643660	five period of Gastrodia elata	6.040
	SRR5643661	five period of Gastrodia elata	3.990
	SRR5643662	five period of Gastrodia elata	6.390
	SRR5643663	five period of Gastrodia elata	13.710
	SRR5643664	five period of Gastrodia elata	10.730
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.690
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.800
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.360
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.110
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.640
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.030
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.580
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.850
SRP279888	Gastro	Gastrodia elata tuber	18.67
	Juven	Juvenile tuber	4.79
	Mother_Gastro	Mother tuber of Gastrodia elata	3.03
	Mother_Juven	Mother tuber of Juvenile	3.31