Detail information of GWHGAAEX006947/evm.TU.scaffold_191.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25620Protein phosphatase 2 regulatory subunit
nrgi|743873311|ref|XP_010906785.1|0PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like [Elaeis guineensis]
Swissprottr|Q5QIT3|2AB2B_ARATH0Serine/threonine protein phosphatase 2A regulatory subunit B''beta
trEMBLtr|M0U9S3|M0U9S3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP16640_001}
TAIRAT5G288500Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019410151251035767-
Transcript Sequence

Network for GWHGAAEX006947

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_73254265.70E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K11583PPP2R3 mRNA surveillance pathway map03015
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.550
SRR2545915Juvenile tuber25.480
SRP108465SRR5643513five period of Gastrodia elata23.190
SRR5643514five period of Gastrodia elata21.620
SRR5643515five period of Gastrodia elata23.140
SRR5643524five period of Gastrodia elata23.540
SRR5643525five period of Gastrodia elata27.470
SRR5643528five period of Gastrodia elata25.370
SRR5643658five period of Gastrodia elata25.570
SRR5643659five period of Gastrodia elata25.910
SRR5643660five period of Gastrodia elata25.330
SRR5643661five period of Gastrodia elata23.470
SRR5643662five period of Gastrodia elata24.460
SRR5643663five period of Gastrodia elata26.430
SRR5643664five period of Gastrodia elata25.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.070
SRR6049655Rhizomagastrodiae_C368-T10_good_123.430
SRR6049656Rhizomagastrodiae_C368-T07_good_125.710
SRR6049657Rhizomagastrodiae_C368-T07_good_124.060
SRR6049658Rhizomagastrodiae_C368-T04_good_125.330
SRR6049659Rhizomagastrodiae_C368-T04_good_123.950
SRR6049660Rhizomagastrodiae_C368-T01_good_125.570
SRR6049661Rhizomagastrodiae_C368-T04_good_123.580
SRR6049662Rhizomagastrodiae_C368-T01_good_125.060
SRR6049663Rhizomagastrodiae_C368-T01_good_125.540
SRR6049664Rhizomagastrodiae_C368-T10_good_124.460
SRR6049665Rhizomagastrodiae_C368-T10_good_124.460
SRP279888GastroGastrodia elata tuber 29.97
JuvenJuvenile tuber37.04
Mother_GastroMother tuber of Gastrodia elata 39.95
Mother_JuvenMother tuber of Juvenile 44.57