Detail information of GWHGAAEX006950/evm.TU.scaffold_191.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15676827|ref|NP_273972.1|5.00E-13cytidine and deoxycytidylate deaminase [Neisseria meningitidis MC58]
KOGKOG27713.00E-63Subunit of tRNA-specific adenosine-34 deaminase
nrgi|719988569|ref|XP_010252377.1|2.02E-84PREDICTED: uncharacterized protein LOC104593956 isoform X3 [Nelumbo nucifera]
trEMBLtr|M0RQF5|M0RQF5_MUSAM1.00E-76Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P08250_001}
TAIRAT5G246703.00E-63Cytidine/deoxycytidylate deaminase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019411262231139080-
Transcript Sequence

Network for GWHGAAEX006950

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00383.22dCMP_cyt_deam_1442662.80E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.530
SRR2545915Juvenile tuber20.410
SRP108465SRR5643513five period of Gastrodia elata8.480
SRR5643514five period of Gastrodia elata10.080
SRR5643515five period of Gastrodia elata8.570
SRR5643524five period of Gastrodia elata8.540
SRR5643525five period of Gastrodia elata7.600
SRR5643528five period of Gastrodia elata6.720
SRR5643658five period of Gastrodia elata5.780
SRR5643659five period of Gastrodia elata15.510
SRR5643660five period of Gastrodia elata12.690
SRR5643661five period of Gastrodia elata10.310
SRR5643662five period of Gastrodia elata12.170
SRR5643663five period of Gastrodia elata12.250
SRR5643664five period of Gastrodia elata11.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.870
SRR6049655Rhizomagastrodiae_C368-T10_good_17.450
SRR6049656Rhizomagastrodiae_C368-T07_good_112.980
SRR6049657Rhizomagastrodiae_C368-T07_good_111.940
SRR6049658Rhizomagastrodiae_C368-T04_good_113.230
SRR6049659Rhizomagastrodiae_C368-T04_good_113.450
SRR6049660Rhizomagastrodiae_C368-T01_good_112.480
SRR6049661Rhizomagastrodiae_C368-T04_good_113.970
SRR6049662Rhizomagastrodiae_C368-T01_good_110.470
SRR6049663Rhizomagastrodiae_C368-T01_good_114.160
SRR6049664Rhizomagastrodiae_C368-T10_good_19.850
SRR6049665Rhizomagastrodiae_C368-T10_good_19.850
SRP279888GastroGastrodia elata tuber 15.85
JuvenJuvenile tuber13.58
Mother_GastroMother tuber of Gastrodia elata 6.42
Mother_JuvenMother tuber of Juvenile 7.01