Detail information of GWHGAAEX006953/evm.TU.scaffold_191.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158318503|ref|YP_001511011.1|1.00E-24WD-40 repeat-containing serine/threonin protein kinase [Frankia sp. EAN1pec]
KOGKOG06050NDR and related serine/threonine kinases
nrgi|672168528|ref|XP_008804266.1|0PREDICTED: serine/threonine-protein kinase tricorner-like isoform X2 [Phoenix dactylifera]
Swissprottr|F4HYG2|IRE3_ARATH1.00E-82Probable serine/threonine protein kinase IRE3 {ECO:0000305}
trEMBLtr|B9SV26|B9SV26_RICCO0Serine/threonine-protein kinase, putative {ECO:0000313|EMBL:EEF32546.1}
TAIRAT3G233100AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019412472931263956-
Transcript Sequence

Network for GWHGAAEX006953

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1214181.20E-63
PF00433.23Pkinase_C4374812.10E-05
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyAGC_NDR

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0004674Molecular Functionprotein serine/threonine kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.140
SRR2545915Juvenile tuber35.290
SRP108465SRR5643513five period of Gastrodia elata13.590
SRR5643514five period of Gastrodia elata11.670
SRR5643515five period of Gastrodia elata13.070
SRR5643524five period of Gastrodia elata11.300
SRR5643525five period of Gastrodia elata26.890
SRR5643528five period of Gastrodia elata25.170
SRR5643658five period of Gastrodia elata49.700
SRR5643659five period of Gastrodia elata15.130
SRR5643660five period of Gastrodia elata18.180
SRR5643661five period of Gastrodia elata11.750
SRR5643662five period of Gastrodia elata13.650
SRR5643663five period of Gastrodia elata21.130
SRR5643664five period of Gastrodia elata18.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.260
SRR6049655Rhizomagastrodiae_C368-T10_good_113.250
SRR6049656Rhizomagastrodiae_C368-T07_good_115.040
SRR6049657Rhizomagastrodiae_C368-T07_good_121.110
SRR6049658Rhizomagastrodiae_C368-T04_good_123.310
SRR6049659Rhizomagastrodiae_C368-T04_good_126.410
SRR6049660Rhizomagastrodiae_C368-T01_good_117.330
SRR6049661Rhizomagastrodiae_C368-T04_good_122.590
SRR6049662Rhizomagastrodiae_C368-T01_good_112.790
SRR6049663Rhizomagastrodiae_C368-T01_good_116.980
SRR6049664Rhizomagastrodiae_C368-T10_good_111.590
SRR6049665Rhizomagastrodiae_C368-T10_good_111.590
SRP279888GastroGastrodia elata tuber 29.04
JuvenJuvenile tuber18.70
Mother_GastroMother tuber of Gastrodia elata 37.12
Mother_JuvenMother tuber of Juvenile 22.41