Gene detail

Detail information of GWHGAAEX006957/evm.TU.scaffold_191.43

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|440683209\|ref\|YP_007158004.1\|	5.00E-16	(Myosin heavy-chain) kinase [Anabaena cylindrica PCC 7122]
KOG	KOG1333	6.00E-41	Uncharacterized conserved protein
nr	gi\|743779792\|ref\|XP_010920342.1\|	0	PREDICTED: WD repeat-containing protein 91-like isoform X3 [Elaeis guineensis]
trEMBL	tr\|M0RT08\|M0RT08_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P17280_001}
TAIR	HS22049979	6.00E-41	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000194	1367205	1396867	+

Transcript Sequence
>GWHTAAEX006957 CTTAAACAGTATCAGTGACTCAGCGTGTATCGGAACTTCGCTGCCACACCGAGAAGCTTTAACCATCCACTATACTGCGATTTGCGTTCGGCGATGTTGTAATTTTATATTTGAGGTCTTCATTTTTGCTGATTAGCTAGATGGAAGAACAAAGCGAAGGTTCTTATCACCCCTCTTTCGAATGCTGCATTTGCCTGTAAATAAAAATACAATGGAGAATATGCAGTACGCTGAAGAACTTGTAAGAGAATTTATTATTTTCAGAGGTTTTACAAATACCCTCCAAGTATTTGAAAGAGAATTATCCACTGATGTTGGCAGAAATTTTCAAGTGGATAAGATTATAGAATTAGTTTTCTCAGTTTATGTGCCCAATTATCAATCAGATAAATTAGTTAGTTTGCTATCCTTTTTCAAGCAATCTTTTTCCTCACCATCAGATGCAGTTCTCTTGTCTACACTATTAAAGATTGAGCTATCGATCTTGCGATATTATATTGTTCATGCTTTTAAGAACGGAAAACAGGACAAGATTGTAGATTTTCTTGCAGCAAATGGGAATTATTTGTTGCAGAGAAGTAAAGAATGGCAGCCCTGGTTTGCTATTCCATATCTCAAGAATCCAAGCCTGGATCCTCAGTTTCGTGTTTATTTTTCGAAGGACTGGTTTGATGTCTTGCAACTTTCTTTCCACAACTTCTTAAGTGAAATCTTCAATGGGACTCGCATCCCTGCTGTTTTAAAGATAAGCTCTGAAAAGAATACGGTCAAGCAACTTAAAAGTGACATTAAACAACTAAACCAGAAGCTATCACAACTTCAGGCTTTGTTAGAGGTAAAGGAAGCAGAAATATTAAAACTGAAAAGTTTGTCACATGAGGCGGCGTTGAAGGATAATGGAAGAATTATTACAAGAGAGGGTTGCCACGAAATTTCTACCTCTAATGATGCCTACATTGGAGATAGGGATGTTGAAGATGGAGGAAATTCCTTAATCATGGATAATGTTTCTCAAGATACAACAATATTAAAATCAGATGCTTCTTATATCTCCTTGAAAAGACGTTCCTCCATACATGATGGCGTGCTGGATGCATCTCAATTGTGTTTTTCAGAAACCAGTCAAGATATATTAAAGGATGATGAGTTCCCTGAAGTGTCGGTTGAGTTTCAGGAAACTTTTCTGGGGCATACAAATCCAATTAGCAGGTGTCGCTTTTCTGCTTCCGGTACTAATGTTGCTAGTGCTTCTGTAGATGGCACTGTCAGGATTTGGGCATATGGATCATCTGTTCCAGCATCAAAAAATGCAACTATATACTGCGGAGCTGAGATTATGTCACTTGAATGGGAATGCAAATCTGATCGTTTGCTGCTCATAGGGACAGCTGATGGAGGTATCAAAGCCTGGAATGTTGATGCTAAGAGAGTTGTCTGTGATCTAAATACAACTCAAGAATTCCCAAGCGTCATCGACTTGAAATGTAGCCCAGTGGAACCAATTTTTGTTTCTGCTGCAGCATCTAGGAGGCATGGCTCTAATAGAATTGATCAAATGGGCTTTGCTTCTTTGACTGTTTGGAACATGAAAACATGGAAAGCCATGGCGTCCCTACCTCTCGGTAAAGATCCACCAGCAATCACTTCATTGAGTTTCAACCACAACGGAAAGATTTTAGCTGCTTCTGCTATCGATGGAATGATTCACATGTTTGATATGTCTGCTGGTCTACAAATCACAGGATGGCCTGCTCATGATTCAGCTGTAAGCTCAGTGCTATTTGGACCAGATGAGACGAGCATATTCAGTTTGGGTTCAGATGGCAAGATCTTTGAATGGAGCCTGCAGAACCAAGGTCAAGTTCTTTGGTCTAGAGATTGCAGCAGGTTTTGCTACCCTGAAAGTGGGAATATATGCAGACATGAAATTGCATTGAACTCAAATGGAAGGAAATTGCTTGTTACATCAGGCTCAGTTAGGTCTCCCATTTACCAGGTGCAAGATCGTGGGAATGCCTTCAGAACACTGCCTCATACTGCGGCAATAACAAGCGTTGATTGGCATCCTACACTTCCTGTCTTCATAACAGGTTCTGCTGATCATTCTGTCAGAGTAACCTCAATTATATCGGAAAAAAGTTGGCTCCCTAGTAGCTCCCCAAAAAGTTCAATTTAGGCCGCCCACTCAAAAATGAATTTAATGCTGGTTTTTGTGAGATTAAAAAATATAATTATTATTTTTGAGAGTTATTTGAGAGATTTGGGAGCTGTGTAACTGGATTATTGATTATCAGTGTTCATTTCTTTGTGCACATCATTTCTATTCTTTTGTTTCATCATGTCTATGCCTTTGATTGCAAGTATCATCCCTTTGATCTATTTATAATTAGCATGCTCTAATATTGTTTGGTGAGATTTTAGAAAAATTTATGTACAGGCTTCTCCTAATTCTGTCCTTAATTTTTTTTGATAGCGAGAGATATGAAT

Network for GWHGAAEX006957

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00400.31	WD40	332	365	2.80E-06
PF00400.31	WD40	487	512	0.26
PF00400.31	WD40	613	645	0.0031

Protein Sequence

Gene family

Gene family	subfamily
Ubiquitin Family	DWD

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.930
SRP064423	SRR2545915	Juvenile tuber	18.490
SRP108465	SRR5643513	five period of Gastrodia elata	11.440
	SRR5643514	five period of Gastrodia elata	15.050
	SRR5643515	five period of Gastrodia elata	10.700
	SRR5643524	five period of Gastrodia elata	12.620
	SRR5643525	five period of Gastrodia elata	10.200
	SRR5643528	five period of Gastrodia elata	6.950
	SRR5643658	five period of Gastrodia elata	10.320
	SRR5643659	five period of Gastrodia elata	9.150
	SRR5643660	five period of Gastrodia elata	11.180
	SRR5643661	five period of Gastrodia elata	8.900
	SRR5643662	five period of Gastrodia elata	9.140
	SRR5643663	five period of Gastrodia elata	11.030
	SRR5643664	five period of Gastrodia elata	9.660
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.270
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.010
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.950
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.500
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.740
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.660
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.240
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.720
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.720
SRP279888	Gastro	Gastrodia elata tuber	13.34
	Juven	Juvenile tuber	11.02
	Mother_Gastro	Mother tuber of Gastrodia elata	10.04
	Mother_Juven	Mother tuber of Juvenile	10.71