Detail information of GWHGAAEX006960/evm.TU.scaffold_191.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743829801|ref|XP_010934244.1|1.44E-142PREDICTED: protein PHR1-LIKE 1-like [Elaeis guineensis]
Swissprottr|Q8GUN5|PHL1_ARATH3.00E-62Protein PHR1-LIKE 1
trEMBLtr|B9SKP0|B9SKP0_RICCO8.00E-115Transcription factor, putative {ECO:0000313|EMBL:EEF35837.1}
TAIRAT4G286103.00E-67phosphate starvation response 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019415740821603722-
Transcript Sequence

Network for GWHGAAEX006960

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding2853361.60E-07
PF14379.5Myb_CC_LHEQLE3684142.40E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms117.640
SRR2545915Juvenile tuber80.920
SRP108465SRR5643513five period of Gastrodia elata59.380
SRR5643514five period of Gastrodia elata58.460
SRR5643515five period of Gastrodia elata64.480
SRR5643524five period of Gastrodia elata54.850
SRR5643525five period of Gastrodia elata69.420
SRR5643528five period of Gastrodia elata61.310
SRR5643658five period of Gastrodia elata70.010
SRR5643659five period of Gastrodia elata65.950
SRR5643660five period of Gastrodia elata75.660
SRR5643661five period of Gastrodia elata64.010
SRR5643662five period of Gastrodia elata70.950
SRR5643663five period of Gastrodia elata69.730
SRR5643664five period of Gastrodia elata77.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.850
SRR6049655Rhizomagastrodiae_C368-T10_good_146.730
SRR6049656Rhizomagastrodiae_C368-T07_good_149.370
SRR6049657Rhizomagastrodiae_C368-T07_good_171.390
SRR6049658Rhizomagastrodiae_C368-T04_good_164.530
SRR6049659Rhizomagastrodiae_C368-T04_good_177.210
SRR6049660Rhizomagastrodiae_C368-T01_good_163.350
SRR6049661Rhizomagastrodiae_C368-T04_good_151.530
SRR6049662Rhizomagastrodiae_C368-T01_good_147.160
SRR6049663Rhizomagastrodiae_C368-T01_good_152.760
SRR6049664Rhizomagastrodiae_C368-T10_good_154.830
SRR6049665Rhizomagastrodiae_C368-T10_good_154.830
SRP279888GastroGastrodia elata tuber 89.37
JuvenJuvenile tuber75.42
Mother_GastroMother tuber of Gastrodia elata 83.96
Mother_JuvenMother tuber of Juvenile 83.23