Detail information of GWHGAAEX006973/evm.TU.scaffold_192.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|228478500|gb|ACQ41836.1|7.79E-83chalcone-flavanone isomerase [Elaeis oleifera]
Swissprottr|Q45QI7|CFI_CAMSI4.00E-82Chalcone--flavonone isomerase
trEMBLtr|C3W5J1|C3W5J1_ELAOL3.00E-83Chalcone-flavonone isomerase family protein {ECO:0000256|RuleBase:RU361158}
TAIRAT3G551201.00E-78Chalcone-flavanone isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000187819475844159-
Transcript Sequence

Network for GWHGAAEX006973

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02431.14Chalcone642661.40E-83
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01859E5.5.1.6 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName
GO:0016872Molecular Functionintramolecular lyase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.940
SRR2545915Juvenile tuber18.100
SRP108465SRR5643513five period of Gastrodia elata105.530
SRR5643514five period of Gastrodia elata70.670
SRR5643515five period of Gastrodia elata69.510
SRR5643524five period of Gastrodia elata69.570
SRR5643525five period of Gastrodia elata17.900
SRR5643528five period of Gastrodia elata14.700
SRR5643658five period of Gastrodia elata11.610
SRR5643659five period of Gastrodia elata49.560
SRR5643660five period of Gastrodia elata36.570
SRR5643661five period of Gastrodia elata39.000
SRR5643662five period of Gastrodia elata29.400
SRR5643663five period of Gastrodia elata24.460
SRR5643664five period of Gastrodia elata31.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_171.050
SRR6049655Rhizomagastrodiae_C368-T10_good_178.800
SRR6049656Rhizomagastrodiae_C368-T07_good_1108.080
SRR6049657Rhizomagastrodiae_C368-T07_good_158.430
SRR6049658Rhizomagastrodiae_C368-T04_good_177.970
SRR6049659Rhizomagastrodiae_C368-T04_good_162.810
SRR6049660Rhizomagastrodiae_C368-T01_good_158.320
SRR6049661Rhizomagastrodiae_C368-T04_good_160.560
SRR6049662Rhizomagastrodiae_C368-T01_good_174.310
SRR6049663Rhizomagastrodiae_C368-T01_good_183.700
SRR6049664Rhizomagastrodiae_C368-T10_good_1155.730
SRR6049665Rhizomagastrodiae_C368-T10_good_1155.730
SRP279888GastroGastrodia elata tuber 47.58
JuvenJuvenile tuber35.68
Mother_GastroMother tuber of Gastrodia elata 91.12
Mother_JuvenMother tuber of Juvenile 59.00