Detail information of GWHGAAEX006974/evm.TU.scaffold_192.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16033.00E-28Copper chaperone
nrgi|719991756|ref|XP_010253353.1|1.80E-42PREDICTED: uncharacterized protein LOC104594656 [Nelumbo nucifera]
Swissprottr|O82089|CCH_ARATH7.00E-15Copper transport protein CCH
trEMBLtr|M0S8F4|M0S8F4_MUSAM4.00E-41Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P16130_001}
TAIRAT5G026003.00E-28Heavy metal transport/detoxification superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000187989365990836-
Transcript Sequence

Network for GWHGAAEX006974

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA1501936.10E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.300
SRR2545915Juvenile tuber12.050
SRP108465SRR5643513five period of Gastrodia elata6.610
SRR5643514five period of Gastrodia elata4.440
SRR5643515five period of Gastrodia elata4.650
SRR5643524five period of Gastrodia elata8.500
SRR5643525five period of Gastrodia elata12.830
SRR5643528five period of Gastrodia elata6.930
SRR5643658five period of Gastrodia elata11.240
SRR5643659five period of Gastrodia elata7.360
SRR5643660five period of Gastrodia elata6.610
SRR5643661five period of Gastrodia elata7.550
SRR5643662five period of Gastrodia elata9.040
SRR5643663five period of Gastrodia elata7.110
SRR5643664five period of Gastrodia elata12.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.130
SRR6049655Rhizomagastrodiae_C368-T10_good_114.110
SRR6049656Rhizomagastrodiae_C368-T07_good_110.570
SRR6049657Rhizomagastrodiae_C368-T07_good_116.340
SRR6049658Rhizomagastrodiae_C368-T04_good_118.640
SRR6049659Rhizomagastrodiae_C368-T04_good_115.720
SRR6049660Rhizomagastrodiae_C368-T01_good_115.760
SRR6049661Rhizomagastrodiae_C368-T04_good_115.100
SRR6049662Rhizomagastrodiae_C368-T01_good_19.040
SRR6049663Rhizomagastrodiae_C368-T01_good_16.390
SRR6049664Rhizomagastrodiae_C368-T10_good_15.640
SRR6049665Rhizomagastrodiae_C368-T10_good_15.640
SRP279888GastroGastrodia elata tuber 24.06
JuvenJuvenile tuber12.24
Mother_GastroMother tuber of Gastrodia elata 14.25
Mother_JuvenMother tuber of Juvenile 6.52