Gene detail

Detail information of GWHGAAEX006996/evm.TU.scaffold_193.16

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743762969\|ref\|XP_010910728.1\|	PREDICTED: uncharacterized protein LOC105036676 [Elaeis guineensis]
trEMBL	tr\|M0T878\|M0T878_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P18800_001}
TAIR	AT1G35660	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000204	533964	567541	-

Transcript Sequence
>GWHTAAEX006996 CGTCGTTGTAGTAATCATCTGTCACGGTAACCTACTGTCTTAAGGACGCGAATTCTGGTTCTGAGCCCCTTTTTCCTAAACCAAACGATCGAGAATTTGAGTTGGAGAAGAATCCATGGAAGATTCGGGGCTTCTGCAGTGCGTGGGGAAACTAAAGGTCACGAAGCCTAAACCTGTAGGTTTTTTGTGCGGGACTCTCCCTGTCCCAACTGATACGGCCTTCGCCACTTTTCATTCTGCCATTGTTCCTATTCCTCACACAATTGGAGCTCCACGTTATCAAATGCTTCCTGCTGAGACCGACCTCAACACTCTTCCACTACTGTCCAATTTCCCGGAAAAAGTCCTCATGGCGGCTTGTCGTACCAGTGAAGATGTACAATGGGATAGTGGTGTACTCCGTCAAAATCTTTTTAAAAAATGTGAAGCACTTGCTGTATCTGGTCTGACAGAATATGGCAATGAAATAGATGTTGTTGCCCCGACAGACATCTTGAAACAGGTTTTTAAGATACCTTATTCCAAGGCCCAATTATCTGTTGCTGTTCAGCGGATTGGAGATACTCTTATTCTAAATGCAGGACCCAATATTGAAGAAGAAGAAAAGCTTTTCAGAAGACAAAACAACCAATCTAAATGTTACGATCATTCTATATTTTTTAATTTTGCAATGCACTCAGTCAGAGCAGAGGCTTGCGATTGTCCTTCTAGTTACCCACCTTCATCACAGAAACAACCAACGCCTCCTAGCTTGCCAGTAAACTTTGGAGCTGTGGAAGATATGTATGTGCCTTCCACCTCTTGCACAAACAAGTCTCAGTTTCTGAATCAGAACTCTGGCGGGGGTAGAATACCCTCCCAGTCCAATGATGTTAAGTACTTCTGGGACAATAAGATGAATAAGCAAAAAAGAAGAAGTTCAAATTCGGTTAAAAGAACTCATGTTGGGGAAAAGCCTAGACATCCAACACAAGATTCTGAGCAACGCAGAAGATTTGGTAACAATGGCTTCCTGAGGGTTCTATTTTGGCAATTTCATAATTTTCGAATGCTTTTGGGTAGTGATATGCTTCTATTTAGCAATGATAAATACGCAGCAGTAAGCTTACACCTGTGGGATGTCACAAGTCCGGTTTCACCATTAATGTGGCTTGAAGCTTGGCTAGACAATGTTATGGCAAGTGTACCGGAATTGGCAATCTGTTACCACCAAAATGGTGTTGTTCAAGGTTATGAACTTTTGAAAACAGATGACGTTTTTCTACTTAAGGGTGTATCTGAGGATGGAATTCCTGCATTCCACCCACAAGTTGTCCAGCAAAATGGTCTTTCAGTTTTGAGGTTTCTCCAAGAGAACTGCAAACAAGATCCTGGTGCATATTGGCTCTTCAAAGGCTCTGGAGAGGATGTAATACAACTCTTTGATTTGTCTGCTCTTCCTAAGAGCAATACAGATGATCATGATAAGGTTCCAAGCCCTATATCATCCTTGCTGCAAAAAGGAAGAAGAGATACCATGTTGTCTCTAGGGACCCTTCTTTACCGTATTGCTCACAGACTGTCCCTCTCAAAGGCACAGACTAACCGGACTAAGTGTGCCCAGTTTTTTAAAAAATGTTTGGATTTTCTTCATGAACAAGACCACATGGTGGTTCGTGCATATGCTCATGAACAATTTGCTCGATTCATCTTGAAATGTAATGAGGAACTGGAGTTGGCATCTGACACTGTTCTCATAGAAGCTGAGGTTAAAATGGCTAATTTGGAAGAAGAATGTTCAGAATTTTCTTTGTCTATGTTTGGTGCAGATGGACAAAGCATAGGACTTTCTGAAGATGATACAGCAACAAAAAATAGAAATGCTATTGCTGGTGTTTCGTTGAATGCCTCTGTCGAGCTTGACATAGAAGACGCTAATTCACAAACAGATTCAAATGCTTACATGCACATGCCACCTGCAGCAAGAAATTTTCCACAAAAAACATCTAGTTCCCAATCAAATGATGTCTTAGATATGTGCCCAACATTGACATCTCCCAGTCTATCTAAAACCATTGTGGATCCAATCTCCTCAAAGTTGGCTGCTGTACACCACGTATCTCAAGCAATTAAATATCTTAGGTGGAAAAGGCAACTGCAAAATGCTCAAGGAGATTTAGCCGACTCTGGAAGCAAATTTCATGAGAGGTCTACAGCTATTAGCTTGTCTTTCTGCGTATGTGGTGATGCCAACTGTATTGAAATATGTGATATTAGGGAATGGCTTCCAAAAGCTAAAATGGACCAGAAGATGTGGAATCTTGTCTTGCTACTAGGAGAGTCATATCTGGCTCTCGGGGAGGCTTACAAAGAGGATGGTCAATTGCATCGTGCTCTTAAGGTTGTTGAATTAGCTTGTTTAATTTATGGATCAATGCCGCAGCATCTGAATGATGCCCAATTTATCTCATCTATGGACAGAGGGGAATCATATCAGCTTAAGTTGAAAGAAAGCAATAGTACTCCCTTTTTTTTAAGAGATGCGCAAGAAGATCTAAATTTCAGTCTATTTAACGAAGGTAATCTTTCTGAACATTTATCTTCTGCATACTTATTCTGGCCTAAGGCCTGGTCTCTTATTGGAGATGTATATGTGGAGTATCAAAGAACGAAAGGTAAAGAAGTTCTAGATAAAAAGGATAATAGAACATCGGGCAATGAGCTTAGGGTGTCAAATGAAGTTGTAAAAGAGGTTATGCGCCTTAAAAAGAAATTAGGTCATTACAAGAAAAACTGCATTTCGTGCTCACTGGTAAACTGTAGCTGTCAAAGCGATAGAGCAAGTAGTGGCAACAGTGCAAGTAGCAGTGGAAATGTTCCCCCATCTTATAGCAGAAAGAATAACATGAAATCAATCTTGAAGACTTTTATTTCTCATGGTGGAAACATAAATGCTACTAGCAGTACCAGGTTGCCAAATTATTTTCATGATTCTGAAAATGATACTTTTGACAGTAGCAATGAAGAAAAGCATGAGATTCCTGCAGATCCATCTAATGCATACTCAACTGTTATGGGTATTTTGGCCAAAGGGGATACATTAAATAGCACATCTTCTAAGCAAGCAGCTTTTTCTGCACCAAGTTTCAATGATGCATCTAAAGTTGGGAATGGTGGTATTTTCAGGTTTCATGGAGGTCCTAAACAAGATGATGCTGAGTACAATTTGTCAGTTGCTATATTCTGTTATGATAGTGCAAGGAAAGCATTGAATGACTTTCCTCTTGATTCAGCAGAATTGATTTCCGTACTAAAGAAGAAAGGCTGGGCTTCTAATGAACTGGGTCGCTACAAACTTGATAAACAAGACTTTCCTTCTGCTGAAGCTGCTTTTGCTGATGCAATTCAGGCATTCAAAGAAGTTTCTGACCATACCAATATCATACTTATTTATTGTAATCTAGGCCATGGAAGAAGATCAGTTGCTGAAGAACTGGTATCAAAGTTGGATGAGCTCATTGAGTATGACATCTTTCAGAATGCATATAAGCAAGCAATTTTGTCCGCAAAAATGGAATATTACGAATCACTAAAACATTATGGTGCTGCGAAACTTGAACTAGACTCTGTTGGGGGAACTTGTGATACTTTGTTATATAATGAAGTGTATACACAGTTTGCTAACACATATTTGAGACTTGGGATGCTTTTGGCAAAAGAAGGCATTTATGTTAAGGTTCACGCTGGTACTAGTCATAAAGATTATTCTGTTAATGTAAGGACATCAGAGCAACAAAAAAAGATAACATCAGCAAATGAAGCTTTTAGGGAGGCACTGTCAATGTATGAATCTCTTGGTGTTGTGCGGAAACAAGAAGCTGCTTTTACACACTTCCAACTTGCCACCTTTCACAGGGACAATTGCTTGAAACTTGTGGATTTAAAACATAAACAAATTAGTTTTGCCAAAGGGGAGAACCCACATATGAAGGCCAAGTGGTATGCTTCCTTAGCTGATAAGCACTGGAACAAGGCTATAGACTTCTATGGCCCGATGACACATCCTTCCATGTATCTTAACATCCTTCTGGAACAAGCAGTCCTTTCTATTGATCTCTCAAACTCATTCAACTCATATGCAATGTTGGAAGCTGCACTGCTCCACCTTCTTGAAGGCCGGAAGATGGTAGGAAGCAATAATATTAATAGAGAATCTGATGGTTTAGATTCACAGTTGAAATCAAAATTTTGGAATCAGCTGCAGTCTCTGCTGAAGAACATGCTGCTGCTGTCTTCTTCTTCCTCTTCTTCGGTTTGGGATAATGGAAAATTGAGAGAGATGTATCGCATGTCGCTGAAATCTTGTGGGTTCAGTCAATTGCACGGCATGCACAAGCTGTGGCTGTCCTGAATTGTGCGAACTGCTCGCTCATATTGAGGTAAGCAGAGAGGCTGAAGACTTTACTTAAAACTTGTATAAACATACTATTGAAAATCATGTGTCAGCTTGAAAGTTTCCCCTTCATATCCACGTATTTGACCGAAAACTACAGCTTTTTGATATACTACTCATAAATACTCCAAACCCGAAACCCGGCTCTGGTTGCCGTTATTGTCGGACCCTGCGTATCAGTCGCCATTCATCCTTGCTCTTGGTCATTGCAACCTT

Network for GWHGAAEX006996

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX006996
MEDSGLLQCVGKLKVTKPKPVGFLCGTLPVPTDTAFATFHSAIVPIPHTIGAPRYQMLPAETDLNTLPLLSNFPEKVLMAACRTSEDVQWDSGVLRQNLFKKCEALAVSGLTEYGNEIDVVAPTDILKQVFKIPYSKAQLSVAVQRIGDTLILNAGPNIEEEEKLFRRQNNQSKCYDHSIFFNFAMHSVRAEACDCPSSYPPSSQKQPTPPSLPVNFGAVEDMYVPSTSCTNKSQFLNQNSGGGRIPSQSNDVKYFWDNKMNKQKRRSSNSVKRTHVGEKPRHPTQDSEQRRRFGNNGFLRVLFWQFHNFRMLLGSDMLLFSNDKYAAVSLHLWDVTSPVSPLMWLEAWLDNVMASVPELAICYHQNGVVQGYELLKTDDVFLLKGVSEDGIPAFHPQVVQQNGLSVLRFLQENCKQDPGAYWLFKGSGEDVIQLFDLSALPKSNTDDHDKVPSPISSLLQKGRRDTMLSLGTLLYRIAHRLSLSKAQTNRTKCAQFFKKCLDFLHEQDHMVVRAYAHEQFARFILKCNEELELASDTVLIEAEVKMANLEEECSEFSLSMFGADGQSIGLSEDDTATKNRNAIAGVSLNASVELDIEDANSQTDSNAYMHMPPAARNFPQKTSSSQSNDVLDMCPTLTSPSLSKTIVDPISSKLAAVHHVSQAIKYLRWKRQLQNAQGDLADSGSKFHERSTAISLSFCVCGDANCIEICDIREWLPKAKMDQKMWNLVLLLGESYLALGEAYKEDGQLHRALKVVELACLIYGSMPQHLNDAQFISSMDRGESYQLKLKESNSTPFFLRDAQEDLNFSLFNEGNLSEHLSSAYLFWPKAWSLIGDVYVEYQRTKGKEVLDKKDNRTSGNELRVSNEVVKEVMRLKKKLGHYKKNCISCSLVNCSCQSDRASSGNSASSSGNVPPSYSRKNNMKSILKTFISHGGNINATSSTRLPNYFHDSENDTFDSSNEEKHEIPADPSNAYSTVMGILAKGDTLNSTSSKQAAFSAPSFNDASKVGNGGIFRFHGGPKQDDAEYNLSVAIFCYDSARKALNDFPLDSAELISVLKKKGWASNELGRYKLDKQDFPSAEAAFADAIQAFKEVSDHTNIILIYCNLGHGRRSVAEELVSKLDELIEYDIFQNAYKQAILSAKMEYYESLKHYGAAKLELDSVGGTCDTLLYNEVYTQFANTYLRLGMLLAKEGIYVKVHAGTSHKDYSVNVRTSEQQKKITSANEAFREALSMYESLGVVRKQEAAFTHFQLATFHRDNCLKLVDLKHKQISFAKGENPHMKAKWYASLADKHWNKAIDFYGPMTHPSMYLNILLEQAVLSIDLSNSFNSYAMLEAALLHLLEGRKMVGSNNINRESDGLDSQLKSKFWNQLQSLLKNMLLLSSSSSSSVWDNGKLREMYRMSLKSCGFSQLHGMHKLWLS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	12.760
SRP064423	SRR2545915	Juvenile tuber	12.930
SRP108465	SRR5643513	five period of Gastrodia elata	4.540
	SRR5643514	five period of Gastrodia elata	4.450
	SRR5643515	five period of Gastrodia elata	3.950
	SRR5643524	five period of Gastrodia elata	4.100
	SRR5643525	five period of Gastrodia elata	3.560
	SRR5643528	five period of Gastrodia elata	3.350
	SRR5643658	five period of Gastrodia elata	4.650
	SRR5643659	five period of Gastrodia elata	4.570
	SRR5643660	five period of Gastrodia elata	5.230
	SRR5643661	five period of Gastrodia elata	4.170
	SRR5643662	five period of Gastrodia elata	5.370
	SRR5643663	five period of Gastrodia elata	5.410
	SRR5643664	five period of Gastrodia elata	5.400
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.720
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.840
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.610
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.250
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.220
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.730
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.020
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.520
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.490
SRP279888	Gastro	Gastrodia elata tuber	7.13
	Juven	Juvenile tuber	8.93
	Mother_Gastro	Mother tuber of Gastrodia elata	4.56
	Mother_Juven	Mother tuber of Juvenile	5.25