Detail information of GWHGAAEX007001/evm.TU.scaffold_193.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|407648686|ref|YP_006812445.1|4.00E-06hypothetical protein O3I_037620 [Nocardia brasiliensis ATCC 700358]
nrgi|431101|gb|AAA20899.1|3.47E-36lectin, partial [Listera ovata]
Swissprottr|B2KNH9|LEC_DENFN9.00E-22Mannose-specific lectin (Precursor)
trEMBLtr|Q40233|Q40233_9ASPA1.00E-36Lectin {ECO:0000313|EMBL:AAA20899.1} (Precursor; Fragment)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000204876451917293+
Transcript Sequence

Network for GWHGAAEX007001

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms531.840
SRR2545915Juvenile tuber4392.110
SRP108465SRR5643513five period of Gastrodia elata4.030
SRR5643514five period of Gastrodia elata6.340
SRR5643515five period of Gastrodia elata1.750
SRR5643524five period of Gastrodia elata0.220
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata1.920
SRR5643658five period of Gastrodia elata3.320
SRR5643659five period of Gastrodia elata7.990
SRR5643660five period of Gastrodia elata6.940
SRR5643661five period of Gastrodia elata3.130
SRR5643662five period of Gastrodia elata0.490
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata4.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.140
SRR6049655Rhizomagastrodiae_C368-T10_good_18.830
SRR6049656Rhizomagastrodiae_C368-T07_good_15.760
SRR6049657Rhizomagastrodiae_C368-T07_good_13.660
SRR6049658Rhizomagastrodiae_C368-T04_good_11.850
SRR6049659Rhizomagastrodiae_C368-T04_good_13.420
SRR6049660Rhizomagastrodiae_C368-T01_good_11.870
SRR6049661Rhizomagastrodiae_C368-T04_good_17.170
SRR6049662Rhizomagastrodiae_C368-T01_good_12.160
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_113.010
SRR6049665Rhizomagastrodiae_C368-T10_good_113.010
SRP279888GastroGastrodia elata tuber 0.89
JuvenJuvenile tuber0.44
Mother_GastroMother tuber of Gastrodia elata 0.27
Mother_JuvenMother tuber of Juvenile 0.00