Detail information of GWHGAAEX007003/evm.TU.scaffold_193.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|296393095|ref|YP_003657979.1|3.00E-12curculin [Segniliparus rotundus DSM 44985]
nrgi|436825|gb|AAA19577.1|1.07E-54lectin [Epipactis helleborine]
Swissprottr|B2KNH9|LEC_DENFN1.00E-41Mannose-specific lectin (Precursor)
trEMBLtr|Q39728|Q39728_EPIHE4.00E-55Lectin {ECO:0000313|EMBL:AAA19577.1} (Precursor)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000204927283928653+
Transcript Sequence

Network for GWHGAAEX007003

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01453.23B_lectin361051.50E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.170
SRR2545915Juvenile tuber0.990
SRP108465SRR5643513five period of Gastrodia elata3368.010
SRR5643514five period of Gastrodia elata2036.150
SRR5643515five period of Gastrodia elata2130.640
SRR5643524five period of Gastrodia elata1251.830
SRR5643525five period of Gastrodia elata24.820
SRR5643528five period of Gastrodia elata11.390
SRR5643658five period of Gastrodia elata17.940
SRR5643659five period of Gastrodia elata1585.970
SRR5643660five period of Gastrodia elata886.960
SRR5643661five period of Gastrodia elata1559.260
SRR5643662five period of Gastrodia elata1003.570
SRR5643663five period of Gastrodia elata2650.420
SRR5643664five period of Gastrodia elata1205.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14358.990
SRR6049655Rhizomagastrodiae_C368-T10_good_15741.220
SRR6049656Rhizomagastrodiae_C368-T07_good_13530.330
SRR6049657Rhizomagastrodiae_C368-T07_good_12743.860
SRR6049658Rhizomagastrodiae_C368-T04_good_173.620
SRR6049659Rhizomagastrodiae_C368-T04_good_136.170
SRR6049660Rhizomagastrodiae_C368-T01_good_1367.400
SRR6049661Rhizomagastrodiae_C368-T04_good_1134.130
SRR6049662Rhizomagastrodiae_C368-T01_good_1928.110
SRR6049663Rhizomagastrodiae_C368-T01_good_156.880
SRR6049664Rhizomagastrodiae_C368-T10_good_17656.860
SRR6049665Rhizomagastrodiae_C368-T10_good_17656.860
SRP279888GastroGastrodia elata tuber 161.32
JuvenJuvenile tuber837.56
Mother_GastroMother tuber of Gastrodia elata 2.54
Mother_JuvenMother tuber of Juvenile 130.86