Detail information of GWHGAAEX007007/evm.TU.scaffold_193.34
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|159901503|ref|YP_001547750.1| | 2.00E-23 | serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|743841536|ref|XP_010937552.1| | 0 | PREDICTED: wall-associated receptor kinase-like 20 [Elaeis guineensis] |
| Swissprot | tr|Q9LZM4|WAKLQ_ARATH | 0 | Wall-associated receptor kinase-like 20 (Precursor) |
| trEMBL | tr|C5YJZ2|C5YJZ2_SORBI | 0 | Putative uncharacterized protein Sb07g010240 {ECO:0000313|EMBL:EES13653.1} |
| TAIR | AT5G02070 | 0 | Protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000204 | 1069361 | 1072816 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007007
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module13 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13947.5 | GUB_WAK_bind | 24 | 122 | 1.20E-11 |
| PF07714.16 | Pkinase_Tyr | 352 | 617 | 2.20E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_WAK_LRK10L-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0030247 | Molecular Function | polysaccharide binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.710 |
| SRR2545915 | Juvenile tuber | 16.030 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 85.660 |
| SRR5643514 | five period of Gastrodia elata | 34.320 | |
| SRR5643515 | five period of Gastrodia elata | 126.920 | |
| SRR5643524 | five period of Gastrodia elata | 40.820 | |
| SRR5643525 | five period of Gastrodia elata | 103.650 | |
| SRR5643528 | five period of Gastrodia elata | 90.580 | |
| SRR5643658 | five period of Gastrodia elata | 34.240 | |
| SRR5643659 | five period of Gastrodia elata | 72.410 | |
| SRR5643660 | five period of Gastrodia elata | 40.900 | |
| SRR5643661 | five period of Gastrodia elata | 64.030 | |
| SRR5643662 | five period of Gastrodia elata | 84.380 | |
| SRR5643663 | five period of Gastrodia elata | 60.750 | |
| SRR5643664 | five period of Gastrodia elata | 220.340 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 244.880 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 145.710 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 170.390 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 200.330 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 150.680 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 195.590 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 361.440 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 176.010 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 97.860 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 299.660 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 132.850 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 132.850 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 53.59 |
| Juven | Juvenile tuber | 30.52 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 167.68 | |
| Mother_Juven | Mother tuber of Juvenile | 102.24 |