Detail information of GWHGAAEX007010/evm.TU.scaffold_193.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|255566456|ref|XP_002524213.1|1.03E-19Transcriptional regulator SUPERMAN, putative [Ricinus communis]
Swissprottr|Q9LHS9|RBE_ARATH5.00E-20Probable transcriptional regulator RABBIT EARS
trEMBLtr|B9SDZ4|B9SDZ4_RICCO4.00E-20Transcriptional regulator SUPERMAN, putative {ECO:0000313|EMBL:EEF38137.1}
TAIRAT2G377401.00E-18zinc-finger protein 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020412233511223998-
Transcript Sequence

Network for GWHGAAEX007010

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.300
SRR2545915Juvenile tuber0.670
SRP108465SRR5643513five period of Gastrodia elata5.100
SRR5643514five period of Gastrodia elata7.200
SRR5643515five period of Gastrodia elata3.370
SRR5643524five period of Gastrodia elata4.980
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.130
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.590
SRR5643662five period of Gastrodia elata0.150
SRR5643663five period of Gastrodia elata0.670
SRR5643664five period of Gastrodia elata0.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.420
SRR6049655Rhizomagastrodiae_C368-T10_good_116.450
SRR6049656Rhizomagastrodiae_C368-T07_good_19.210
SRR6049657Rhizomagastrodiae_C368-T07_good_13.580
SRR6049658Rhizomagastrodiae_C368-T04_good_16.750
SRR6049659Rhizomagastrodiae_C368-T04_good_15.820
SRR6049660Rhizomagastrodiae_C368-T01_good_16.320
SRR6049661Rhizomagastrodiae_C368-T04_good_111.310
SRR6049662Rhizomagastrodiae_C368-T01_good_110.570
SRR6049663Rhizomagastrodiae_C368-T01_good_18.240
SRR6049664Rhizomagastrodiae_C368-T10_good_116.850
SRR6049665Rhizomagastrodiae_C368-T10_good_116.850
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.66
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.08