Detail information of GWHGAAEX007018/evm.TU.scaffold_193.51


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521459321|ref|YP_008150972.1|1.00E-24peptidyl-prolyl cis-trans isomerase [Sorangium cellulosum So0157-2]
KOGKOG05433.00E-87FKBP-type peptidyl-prolyl cis-trans isomerase
nrgi|720003083|ref|XP_010256876.1|1.13E-99PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Nelumbo nucifera]
Swissprottr|Q9M2S7|FK201_ARATH8.00E-88Peptidyl-prolyl cis-trans isomerase FKBP20-1
trEMBLtr|I3T0H3|I3T0H3_MEDTR1.00E-92Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}
TAIRAT3G555203.00E-87FKBP-like peptidyl-prolyl cis-trans isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020415232331578039+
Transcript Sequence

Network for GWHGAAEX007018

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00254.27FKBP_C341181.30E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms77.670
SRR2545915Juvenile tuber93.810
SRP108465SRR5643513five period of Gastrodia elata6.500
SRR5643514five period of Gastrodia elata7.370
SRR5643515five period of Gastrodia elata10.520
SRR5643524five period of Gastrodia elata7.280
SRR5643525five period of Gastrodia elata126.570
SRR5643528five period of Gastrodia elata113.020
SRR5643658five period of Gastrodia elata136.010
SRR5643659five period of Gastrodia elata94.050
SRR5643660five period of Gastrodia elata88.120
SRR5643661five period of Gastrodia elata89.530
SRR5643662five period of Gastrodia elata92.310
SRR5643663five period of Gastrodia elata101.040
SRR5643664five period of Gastrodia elata94.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_181.560
SRR6049655Rhizomagastrodiae_C368-T10_good_154.070
SRR6049656Rhizomagastrodiae_C368-T07_good_189.000
SRR6049657Rhizomagastrodiae_C368-T07_good_160.520
SRR6049658Rhizomagastrodiae_C368-T04_good_170.100
SRR6049659Rhizomagastrodiae_C368-T04_good_163.770
SRR6049660Rhizomagastrodiae_C368-T01_good_166.420
SRR6049661Rhizomagastrodiae_C368-T04_good_162.990
SRR6049662Rhizomagastrodiae_C368-T01_good_174.530
SRR6049663Rhizomagastrodiae_C368-T01_good_175.920
SRR6049664Rhizomagastrodiae_C368-T10_good_1106.220
SRR6049665Rhizomagastrodiae_C368-T10_good_1106.220
SRP279888GastroGastrodia elata tuber 111.15
JuvenJuvenile tuber90.49
Mother_GastroMother tuber of Gastrodia elata 80.07
Mother_JuvenMother tuber of Juvenile 82.23