Detail information of GWHGAAEX007022/evm.TU.scaffold_194.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01542.00E-108RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains
nrgi|743775315|ref|XP_010918036.1|2.98E-142PREDICTED: uncharacterized protein LOC105042494 [Elaeis guineensis]
trEMBLtr|C5YCI7|C5YCI7_SORBI3.00E-133Putative uncharacterized protein Sb06g023220 {ECO:0000313|EMBL:EES11150.1}
TAIRAT5G085402.00E-108Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000192192210210916-
Transcript Sequence

Network for GWHGAAEX007022

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.210
SRR2545915Juvenile tuber30.740
SRP108465SRR5643513five period of Gastrodia elata22.900
SRR5643514five period of Gastrodia elata21.590
SRR5643515five period of Gastrodia elata23.870
SRR5643524five period of Gastrodia elata20.480
SRR5643525five period of Gastrodia elata14.660
SRR5643528five period of Gastrodia elata18.100
SRR5643658five period of Gastrodia elata12.600
SRR5643659five period of Gastrodia elata28.230
SRR5643660five period of Gastrodia elata34.310
SRR5643661five period of Gastrodia elata39.310
SRR5643662five period of Gastrodia elata44.470
SRR5643663five period of Gastrodia elata41.100
SRR5643664five period of Gastrodia elata37.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.550
SRR6049655Rhizomagastrodiae_C368-T10_good_118.340
SRR6049656Rhizomagastrodiae_C368-T07_good_128.480
SRR6049657Rhizomagastrodiae_C368-T07_good_122.290
SRR6049658Rhizomagastrodiae_C368-T04_good_124.190
SRR6049659Rhizomagastrodiae_C368-T04_good_120.850
SRR6049660Rhizomagastrodiae_C368-T01_good_120.430
SRR6049661Rhizomagastrodiae_C368-T04_good_126.040
SRR6049662Rhizomagastrodiae_C368-T01_good_129.620
SRR6049663Rhizomagastrodiae_C368-T01_good_123.090
SRR6049664Rhizomagastrodiae_C368-T10_good_123.040
SRR6049665Rhizomagastrodiae_C368-T10_good_123.040
SRP279888GastroGastrodia elata tuber 65.29
JuvenJuvenile tuber31.43
Mother_GastroMother tuber of Gastrodia elata 17.15
Mother_JuvenMother tuber of Juvenile 27.99