Detail information of GWHGAAEX007027/evm.TU.scaffold_194.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|731437177|ref|XP_010646869.1|8.37E-13PREDICTED: protein FD-like [Vitis vinifera]
Swissprottr|Q84JK2|FD_ARATH1.00E-12Protein FD
trEMBLtr|B9GQR4|B9GQR4_POPTR5.00E-13Uncharacterized protein {ECO:0000313|EMBL:EEE79965.2}
TAIRAT4G359005.00E-11Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000192970309970827-
Transcript Sequence

Network for GWHGAAEX007027

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.250
SRR2545915Juvenile tuber17.690
SRP108465SRR5643513five period of Gastrodia elata11.340
SRR5643514five period of Gastrodia elata14.700
SRR5643515five period of Gastrodia elata9.440
SRR5643524five period of Gastrodia elata11.690
SRR5643525five period of Gastrodia elata7.970
SRR5643528five period of Gastrodia elata5.050
SRR5643658five period of Gastrodia elata7.450
SRR5643659five period of Gastrodia elata22.260
SRR5643660five period of Gastrodia elata36.360
SRR5643661five period of Gastrodia elata26.940
SRR5643662five period of Gastrodia elata11.970
SRR5643663five period of Gastrodia elata24.370
SRR5643664five period of Gastrodia elata26.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.060
SRR6049655Rhizomagastrodiae_C368-T10_good_116.710
SRR6049656Rhizomagastrodiae_C368-T07_good_17.760
SRR6049657Rhizomagastrodiae_C368-T07_good_122.400
SRR6049658Rhizomagastrodiae_C368-T04_good_17.950
SRR6049659Rhizomagastrodiae_C368-T04_good_16.670
SRR6049660Rhizomagastrodiae_C368-T01_good_17.410
SRR6049661Rhizomagastrodiae_C368-T04_good_15.900
SRR6049662Rhizomagastrodiae_C368-T01_good_15.740
SRR6049663Rhizomagastrodiae_C368-T01_good_13.270
SRR6049664Rhizomagastrodiae_C368-T10_good_15.320
SRR6049665Rhizomagastrodiae_C368-T10_good_15.320
SRP279888GastroGastrodia elata tuber 47.37
JuvenJuvenile tuber57.66
Mother_GastroMother tuber of Gastrodia elata 33.56
Mother_JuvenMother tuber of Juvenile 51.91