Detail information of GWHGAAEX007030/evm.TU.scaffold_194.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434394022|ref|YP_007128969.1|5.00E-30Aquaporin Z [Gloeocapsa sp. PCC 7428]
KOGKOG02232.00E-170Aquaporin (major intrinsic protein family)
nrgi|694995050|ref|XP_009412922.1|3.64E-176PREDICTED: probable aquaporin PIP2-6 [Musa acuminata subsp. malaccensis]
Swissprottr|Q7XLR1|PIP26_ORYSJ9.00E-175Probable aquaporin PIP2-6
trEMBLtr|M0RWE4|M0RWE4_MUSAM1.00E-176Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P02360_001}
TAIRAT4G351002.00E-170plasma membrane intrinsic protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019213261881334243+
Transcript Sequence

Network for GWHGAAEX007030

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP342635.50E-83
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.960
SRR2545915Juvenile tuber25.690
SRP108465SRR5643513five period of Gastrodia elata164.020
SRR5643514five period of Gastrodia elata180.790
SRR5643515five period of Gastrodia elata177.480
SRR5643524five period of Gastrodia elata135.870
SRR5643525five period of Gastrodia elata71.850
SRR5643528five period of Gastrodia elata24.520
SRR5643658five period of Gastrodia elata127.070
SRR5643659five period of Gastrodia elata38.670
SRR5643660five period of Gastrodia elata21.550
SRR5643661five period of Gastrodia elata26.370
SRR5643662five period of Gastrodia elata21.210
SRR5643663five period of Gastrodia elata52.600
SRR5643664five period of Gastrodia elata33.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1202.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1185.540
SRR6049656Rhizomagastrodiae_C368-T07_good_1204.110
SRR6049657Rhizomagastrodiae_C368-T07_good_1180.460
SRR6049658Rhizomagastrodiae_C368-T04_good_1135.360
SRR6049659Rhizomagastrodiae_C368-T04_good_1101.230
SRR6049660Rhizomagastrodiae_C368-T01_good_1109.860
SRR6049661Rhizomagastrodiae_C368-T04_good_1184.290
SRR6049662Rhizomagastrodiae_C368-T01_good_1184.880
SRR6049663Rhizomagastrodiae_C368-T01_good_199.270
SRR6049664Rhizomagastrodiae_C368-T10_good_1198.260
SRR6049665Rhizomagastrodiae_C368-T10_good_1198.260
SRP279888GastroGastrodia elata tuber 27.14
JuvenJuvenile tuber75.85
Mother_GastroMother tuber of Gastrodia elata 0.62
Mother_JuvenMother tuber of Juvenile 6.40