Detail information of GWHGAAEX007048/evm.TU.scaffold_195.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19733.00E-40Chromatin remodeling protein, contains PHD Zn-finger
nrgi|672185826|ref|XP_008812924.1|1.23E-93PREDICTED: PHD finger protein ING1-like isoform X3 [Phoenix dactylifera]
Swissprottr|Q9LIQ6|ING1_ARATH3.00E-64PHD finger protein ING1
trEMBLtr|M0RWP9|M0RWP9_MUSAM7.00E-90PHD finger protein ING {ECO:0000256|RuleBase:RU361213}
TAIRAT3G240103.00E-40RING/FYVE/PHD zinc finger superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000200552958578898-
Transcript Sequence

Network for GWHGAAEX007048

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12998.6ING31114.20E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.450
SRR2545915Juvenile tuber40.800
SRP108465SRR5643513five period of Gastrodia elata34.860
SRR5643514five period of Gastrodia elata27.550
SRR5643515five period of Gastrodia elata31.520
SRR5643524five period of Gastrodia elata28.740
SRR5643525five period of Gastrodia elata42.680
SRR5643528five period of Gastrodia elata37.630
SRR5643658five period of Gastrodia elata38.700
SRR5643659five period of Gastrodia elata34.000
SRR5643660five period of Gastrodia elata40.050
SRR5643661five period of Gastrodia elata33.490
SRR5643662five period of Gastrodia elata36.710
SRR5643663five period of Gastrodia elata38.920
SRR5643664five period of Gastrodia elata43.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.040
SRR6049655Rhizomagastrodiae_C368-T10_good_128.000
SRR6049656Rhizomagastrodiae_C368-T07_good_132.200
SRR6049657Rhizomagastrodiae_C368-T07_good_140.430
SRR6049658Rhizomagastrodiae_C368-T04_good_133.600
SRR6049659Rhizomagastrodiae_C368-T04_good_138.660
SRR6049660Rhizomagastrodiae_C368-T01_good_130.350
SRR6049661Rhizomagastrodiae_C368-T04_good_125.090
SRR6049662Rhizomagastrodiae_C368-T01_good_128.620
SRR6049663Rhizomagastrodiae_C368-T01_good_129.000
SRR6049664Rhizomagastrodiae_C368-T10_good_140.120
SRR6049665Rhizomagastrodiae_C368-T10_good_140.120
SRP279888GastroGastrodia elata tuber 36.58
JuvenJuvenile tuber38.17
Mother_GastroMother tuber of Gastrodia elata 33.18
Mother_JuvenMother tuber of Juvenile 34.53