Detail information of GWHGAAEX007051/evm.TU.scaffold_195.28
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743857191|ref|XP_010942060.1| | 1.39E-154 | PREDICTED: shikimate O-hydroxycinnamoyltransferase-like [Elaeis guineensis] |
| Swissprot | tr|Q9FI78|HST_ARATH | 2.00E-97 | Shikimate O-hydroxycinnamoyltransferase |
| trEMBL | tr|I1H0B3|I1H0B3_BRADI | 5.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G47232.1} |
| TAIR | AT5G48930 | 7.00E-97 | hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000200 | 714267 | 715747 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007051
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02458.14 | Transferase | 6 | 424 | 1.60E-82 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13065 | E2.3.1.133, HCT | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 | ||
| Flavonoid biosynthesis | map00941 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016747 | Molecular Function | transferase activity, transferring acyl groups other than amino-acyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.110 |
| SRR2545915 | Juvenile tuber | 9.330 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.030 |
| SRR5643514 | five period of Gastrodia elata | 18.380 | |
| SRR5643515 | five period of Gastrodia elata | 24.830 | |
| SRR5643524 | five period of Gastrodia elata | 22.330 | |
| SRR5643525 | five period of Gastrodia elata | 15.070 | |
| SRR5643528 | five period of Gastrodia elata | 15.630 | |
| SRR5643658 | five period of Gastrodia elata | 13.880 | |
| SRR5643659 | five period of Gastrodia elata | 56.020 | |
| SRR5643660 | five period of Gastrodia elata | 45.600 | |
| SRR5643661 | five period of Gastrodia elata | 40.690 | |
| SRR5643662 | five period of Gastrodia elata | 29.700 | |
| SRR5643663 | five period of Gastrodia elata | 33.450 | |
| SRR5643664 | five period of Gastrodia elata | 40.900 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 29.500 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 22.710 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 29.430 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 27.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.350 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.970 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.660 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 26.860 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.430 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.950 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 22.110 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 22.110 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 19.82 |
| Juven | Juvenile tuber | 20.20 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.59 | |
| Mother_Juven | Mother tuber of Juvenile | 18.22 |