Detail information of GWHGAAEX007057/evm.TU.scaffold_195.39
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|451948279|ref|YP_007468874.1| | 6.00E-36 | serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523] |
| KOG | KOG0583 | 3.00E-178 | Serine/threonine protein kinase |
| nr | gi|672121145|ref|XP_008783865.1| | 0 | PREDICTED: CBL-interacting protein kinase 6-like [Phoenix dactylifera] |
| Swissprot | tr|Q6Z9F4|CIPK6_ORYSJ | 0 | CBL-interacting protein kinase 6 |
| trEMBL | tr|W5EDA5|W5EDA5_WHEAT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_4BS_C36E0B372.1} |
| TAIR | AT4G30960 | 3.00E-178 | SOS3-interacting protein 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000200 | 1016412 | 1017716 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007057
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 22 | 277 | 1.10E-71 |
| PF03822.13 | NAF | 296 | 346 | 3.60E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_CAMKL-CHK1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0007165 | Biological Process | signal transduction |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.230 |
| SRR2545915 | Juvenile tuber | 12.280 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.770 |
| SRR5643514 | five period of Gastrodia elata | 14.850 | |
| SRR5643515 | five period of Gastrodia elata | 20.980 | |
| SRR5643524 | five period of Gastrodia elata | 12.210 | |
| SRR5643525 | five period of Gastrodia elata | 74.380 | |
| SRR5643528 | five period of Gastrodia elata | 41.670 | |
| SRR5643658 | five period of Gastrodia elata | 60.740 | |
| SRR5643659 | five period of Gastrodia elata | 19.660 | |
| SRR5643660 | five period of Gastrodia elata | 21.830 | |
| SRR5643661 | five period of Gastrodia elata | 17.590 | |
| SRR5643662 | five period of Gastrodia elata | 18.670 | |
| SRR5643663 | five period of Gastrodia elata | 12.340 | |
| SRR5643664 | five period of Gastrodia elata | 13.420 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.350 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 28.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 41.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 34.880 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 35.200 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.300 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 32.050 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 48.840 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 31.920 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.430 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 27.780 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 27.780 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 18.30 |
| Juven | Juvenile tuber | 14.78 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.31 | |
| Mother_Juven | Mother tuber of Juvenile | 11.79 |