Detail information of GWHGAAEX007065/evm.TU.scaffold_195.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|590572852|ref|XP_007011960.1|3.75E-113LJRHL1-like 1 [Theobroma cacao]
Swissprottr|Q9ZUG9|BH066_ARATH8.00E-80Transcription factor bHLH66
trEMBLtr|A0A061GR23|A0A061GR23_THECC1.00E-113LJRHL1-like 1 {ECO:0000313|EMBL:EOY29579.1}
TAIRAT2G242603.00E-79LJRHL1-like 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020012325331237788-
Transcript Sequence

Network for GWHGAAEX007065

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH1722171.90E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.430
SRR2545915Juvenile tuber1.680
SRP108465SRR5643513five period of Gastrodia elata39.880
SRR5643514five period of Gastrodia elata39.760
SRR5643515five period of Gastrodia elata24.100
SRR5643524five period of Gastrodia elata29.950
SRR5643525five period of Gastrodia elata74.140
SRR5643528five period of Gastrodia elata56.430
SRR5643658five period of Gastrodia elata66.080
SRR5643659five period of Gastrodia elata13.810
SRR5643660five period of Gastrodia elata9.470
SRR5643661five period of Gastrodia elata12.660
SRR5643662five period of Gastrodia elata9.360
SRR5643663five period of Gastrodia elata7.560
SRR5643664five period of Gastrodia elata9.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.230
SRR6049655Rhizomagastrodiae_C368-T10_good_136.090
SRR6049656Rhizomagastrodiae_C368-T07_good_125.580
SRR6049657Rhizomagastrodiae_C368-T07_good_118.650
SRR6049658Rhizomagastrodiae_C368-T04_good_118.840
SRR6049659Rhizomagastrodiae_C368-T04_good_118.520
SRR6049660Rhizomagastrodiae_C368-T01_good_127.300
SRR6049661Rhizomagastrodiae_C368-T04_good_119.140
SRR6049662Rhizomagastrodiae_C368-T01_good_136.100
SRR6049663Rhizomagastrodiae_C368-T01_good_141.920
SRR6049664Rhizomagastrodiae_C368-T10_good_146.110
SRR6049665Rhizomagastrodiae_C368-T10_good_146.110
SRP279888GastroGastrodia elata tuber 10.33
JuvenJuvenile tuber15.51
Mother_GastroMother tuber of Gastrodia elata 53.73
Mother_JuvenMother tuber of Juvenile 36.69