Gene detail

Detail information of GWHGAAEX007081/evm.TU.scaffold_196.14

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0698	1.00E-172	Serine/threonine protein phosphatase
nr	gi\|743824630\|ref\|XP_010932828.1\|	0	PREDICTED: uncharacterized protein LOC105053399 [Elaeis guineensis]
Swissprot	tr\|A3CCP9\|P2C76_ORYSJ	1.00E-136	Putative protein phosphatase 2C 76 (Precursor)
trEMBL	tr\|M0S6D0\|M0S6D0_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P08890_001}
TAIR	AT3G63340_1	1.00E-172	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000190	663051	731636	-

Transcript Sequence
>GWHTAAEX007081 ATGGCAGTAACAAAATTAATATTCAGTTTAGGGTTTCTTCTTATCTGTGTTCGAATAGTTGCTTGCGAAACCCCAACTTGTGTGGCTGTTTACAAGGAAGGTGGAGCGCCTGCGGTTTTCCAGTCGCTTAAATGTCCCTGGTGGACGCTTCCTGTCGATGATCCTGGCCGATCTCCCACCAACTGCCAGGTCGCTGTCCTCCAGGGAAGGCGCAGGTCTCAAGAAGACCGTGCCGTCTGCACTTTAGATATAAGGATCCCATTTATAGGAAGAAGAGGAATCAAGGAGATCTCAGTTGGCATTACAGCTATTTTTGATGGCCATAATGGTGCTGAAGCAAGTGATTTGGCTTCCAAACTTCTAGTGGAGTATTTTTCATTACATGTTTATTTTGTTCTTGATGGGATATATTCGGCTACATTCAAGAAGCCTATTGAGAAATTGACATACAATGAAGAGCAAGATATAATTATCCAAGTCCTTGAATCGGCCAAAATGGAAAGTTGGTTTAATTGGGGTGAAAAAAGGTCTGGGTGGTTAACTACTATATATGATGAATCGTTTTATTTGGAAATTCTCAAAGAATCATTGCTGAGGACAATTCATGATATTGATATGATATTTTCTAAGGAAGCTTTAAAATTTAACCTTGATTCTGGTACAACAGCTGCAATAGTTCTTATAGCAGATGGCCGCATTTTAACTGCCAATATTGGTGATTCAAAGGCCTTTCTGTGTTCTGAACGTTCTCATCCTCTCCGTGAAAAAGGCACAAAGTCAAAATTAAGTAGGCGTAGGAGACATGAAGCCGTTATCTCTTCGCTAAATGTCCATGGAGGCTCTAAAATGACAAATGATAGCACAATAGGATACTATGCTAAGGAACTTACAAGAGATCATCACCTTGCTCGAGATGATGAAAGAAATCGTGTGGAAGCTGCGGGTGGTTCTGTTGTGGAGTGGGCTGGAGTTCTTCGGGTCAATGGGAAGCTAGTTTTGTCACGTGCAATTGGAGATGTACCTTTTAAAAGATATGGTGTTATATCCATTCCTGAGGTCACCGGTTGGCAACATATTAGTAAAAATGACAGTTTATTAATTACTGCATCTGATGGAATTTTTGAAAAAATGACTACCCAAGAAGTCTGCAATCTCTTATGGGATGAGAACTTACCATCCAGCAGTAAATCAGTGTGTATGCATGTTGGTTTATCACCTTCTTGTGCTGATTCAATTGTAAATAGTGCTTTTGATAGAGGAAGCATGGACAATTTAGCTGCTGTTGTTGTTCCTTTGGGATCTAGTGGCGGTCTTGAGGTTTTCTCTAAAGATCAGCTTGATGCAGTGGATTTACCATCTTTTGAGGCGCAAAAGGACATAAACAAAGTAGGGCTGCAGGGGAGTATTGGAGTTGGCACAAGTATTCTTTCAACAGATTATTATAAGAAAATGATTTCAAAGCTTGATCGGTTGGTGATTGAAGCAAGGAACAAGACATTAGGATGCTTCTATCTATGTGAAAATCTTAATAATGACAAGGAGTATATTTTTCAATCCCCTAACAATGCCAGTGAGAATGCTTTTACTGATTTTGATTACACAACGCTGGAGCCTATTGAGTCTTATTCTAGTGGGGGGTCCTTAAATTTATACAATGATCATAAACTATGCTGGCACTTTGGGATTCACGAGGGAGATAAAGGTCAATGTACTAGTCCTGAAATTATCACTGGCCTTTTTGGGCTGCTTGATTCTGGTTCATACAATGACACTAAATTCAATCATACAAAGTTCTTTGGTCATAGAATACCTGATCTAAGGTACAAACTAAAGCGAAAGTTTGATCGAGGTTCATATGGTGAAGTTTGGCTGGCATTTCGTTGGAATTGTTCTGAAGAACATGATGCATTTAATTTTTTGCATAAAGGGCAGGTTTTCATTTCGGGTAGCCCATGGCTTAATTCACATTTGTATAATGAAAACCCATCAGTGAATCTTTCCAATGAATCTTGCAATAGTAACTTAAATGATGAAGATTCATTCATTTTAAAACGTATAATGGTGGAGCAAGGGAGCAGGGTTTATTTGAGCGGCCTACGTGAAAAGTATTTTGGTGAAATGTTCTTAAACGCTTTTTTTTCCTTAAAGGATGTGCCAATGACAGGATTCTCCACATCTTCATTGGGAGATGAAATCAATTCTGACAACTTGATATGGAAAGATATATCTAGTGTTGATGAAAAAATTTGCCGATATCATATTAAAGCTTATAATGGCAGCTTTAAAATAACAAAGTCTAACTGTAAAGATAGCTTAAAATATATAGCTCGATTTATAGAATCTTTTGAATCCGAGTCAAATGAGATATGGCTTGTGTTCCACAATGAAGGCCTATCCCTCACAAAGCTGATATACACTACAGAAGAAGCAAACACATTAAACATTGATGAAATAGATGAAAATATGAAACGATTCCAAATGTTACGTCCATCAAAATGGTGGTACTGGCTTCGAAGAACTGAAGCAGGAAAGAAGGAAATGCAGAGTCTTATATGGCAATTGAGAATATGA

Network for GWHGAAEX007081

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00481.20	PP2C	203	424	2.90E-32

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.440
SRP064423	SRR2545915	Juvenile tuber	17.510
SRP108465	SRR5643513	five period of Gastrodia elata	8.910
	SRR5643514	five period of Gastrodia elata	9.200
	SRR5643515	five period of Gastrodia elata	9.370
	SRR5643524	five period of Gastrodia elata	10.390
	SRR5643525	five period of Gastrodia elata	11.770
	SRR5643528	five period of Gastrodia elata	9.980
	SRR5643658	five period of Gastrodia elata	11.100
	SRR5643659	five period of Gastrodia elata	9.720
	SRR5643660	five period of Gastrodia elata	11.810
	SRR5643661	five period of Gastrodia elata	9.560
	SRR5643662	five period of Gastrodia elata	10.750
	SRR5643663	five period of Gastrodia elata	11.570
	SRR5643664	five period of Gastrodia elata	12.320
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.660
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.580
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.810
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.680
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.270
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.580
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.820
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.820
SRP279888	Gastro	Gastrodia elata tuber	18.02
	Juven	Juvenile tuber	17.93
	Mother_Gastro	Mother tuber of Gastrodia elata	15.33
	Mother_Juven	Mother tuber of Juvenile	18.59