Detail information of GWHGAAEX007084/evm.TU.scaffold_196.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04695.00E-20Elongation factor 2
nrgi|573919268|ref|XP_006647249.1|5.36E-21PREDICTED: elongation factor 2-like isoform X1 [Oryza brachyantha]
Swissprottr|O23755|EF2_BETVU4.00E-18Elongation factor 2
trEMBLtr|J3LDA2|J3LDA2_ORYBR2.00E-21Uncharacterized protein {ECO:0000313|EnsemblPlants:OB02G26190.1}
TAIRAT1G560755.00E-20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000190903362922343+
Transcript Sequence

Network for GWHGAAEX007084

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03234EEF2 AMPK signaling pathway map04152
Oxytocin signaling pathwaymap04921

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.410
SRR2545915Juvenile tuber2.120
SRP108465SRR5643513five period of Gastrodia elata1.210
SRR5643514five period of Gastrodia elata2.350
SRR5643515five period of Gastrodia elata2.580
SRR5643524five period of Gastrodia elata1.980
SRR5643525five period of Gastrodia elata4.880
SRR5643528five period of Gastrodia elata1.580
SRR5643658five period of Gastrodia elata2.520
SRR5643659five period of Gastrodia elata3.080
SRR5643660five period of Gastrodia elata4.620
SRR5643661five period of Gastrodia elata1.870
SRR5643662five period of Gastrodia elata2.650
SRR5643663five period of Gastrodia elata3.880
SRR5643664five period of Gastrodia elata2.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.340
SRR6049655Rhizomagastrodiae_C368-T10_good_11.920
SRR6049656Rhizomagastrodiae_C368-T07_good_12.380
SRR6049657Rhizomagastrodiae_C368-T07_good_11.770
SRR6049658Rhizomagastrodiae_C368-T04_good_12.860
SRR6049659Rhizomagastrodiae_C368-T04_good_12.430
SRR6049660Rhizomagastrodiae_C368-T01_good_11.810
SRR6049661Rhizomagastrodiae_C368-T04_good_13.080
SRR6049662Rhizomagastrodiae_C368-T01_good_13.470
SRR6049663Rhizomagastrodiae_C368-T01_good_12.530
SRR6049664Rhizomagastrodiae_C368-T10_good_11.120
SRR6049665Rhizomagastrodiae_C368-T10_good_11.120
SRP279888GastroGastrodia elata tuber 2.55
JuvenJuvenile tuber0.20
Mother_GastroMother tuber of Gastrodia elata 1.99
Mother_JuvenMother tuber of Juvenile 0.99