Gene detail

Detail information of GWHGAAEX007086/evm.TU.scaffold_196.21

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672129849\|ref\|XP_008788442.1\|	0	PREDICTED: uncharacterized protein LOC103706182 [Phoenix dactylifera]
trEMBL	tr\|U5DCT0\|U5DCT0_AMBTC	0	Uncharacterized protein {ECO:0000313\|EMBL:ERN18213.1}
TAIR	AT2G17840	3.00E-164	Senescence/dehydration-associated protein-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000190	1048178	1067428	-

Transcript Sequence
>GWHTAAEX007086 TTCCTGATTGAATTGAAGGAGATGCATAATAGGCAGGAAATGCATTGTAAAATGGTAATTTTCTTCTTAATCCATTGTAAAATGAAAACTTATAAAATGAACAATGCTAGTTACATCTTAATTGGATGTAATTAAGATCTAAATCATTGCATGATTGACTATTAAATGAATATGTTACTTTGTGCAATCGACTGACTTATAGCTGTGACTCAGCCAATTCATTATCAAAATGATATCGAAGGTTAAGATGGGAAAATGTATAAGCTTATATGATAAAGGTTGGTTGGTGGCAAAAGACTACACATATTAACGAAGCTGCATATTATGTTTTCACCCAGTAGCAACCACATCTGCCACCGCCTCCGCAATCGACTCCGCAACCATCTCTACAACAACTGCAACCGCCATTGTAGGCTATATATATGATAGTTTGTGCTTGTAATATTACTGGAAATTTCTCTATTCCTACTTTAAGTATTCTATCTATCTATGGGTTTTAAATTATAGGCTCCATCAAGTAGAGATGTAGTTCATTTATGACTATATGACTGTGTTCGTGGACGGCATGGGGGTTGGGCACATGGGACAGAGAAAGGGCGAATGTAGAGCACATCTCATGGGTCCAACATGTGGCTAACACAGCGAGATATTATCCGCGTCTGATACGTGTCAGACGCAGGTGCGTTCACTGGCTATCATTTGACGAGCAAGGGGTCTCTCCCCCTTTGCCCATTCACACGTCTTCCCATTTCTATTTTTTTGTCGCTCGGAAGGATTCTCCATTCTGATACGCATTCCTCCTCCCAATTCATTGATCTGTGCCACCCGACGCTCGCTCTGACTCCTTTCGTTCCCATGTCTTCTCCGAATCAAGCAAAACAAGCACTCTACCCGGAAGTTCTCGACTATAATCCTGCTATCAATTCTGTTTTCCTCTCAAATCCCAACCCGTCATCCTCGTCCCTCTACCCCACTCTTGATCAACCCTCGCCTTACGATCCTAAACCCTCGGTTCTCTACCCCTCTGTCGAGATGAAGGATCTCGCCAATCTTTTTCCGGACTCCGACGCCGCCGCCCCCACGCTTCCATCGCCAGTGGAAGAGATATTTCTCCGCATCCCCGGCGCCATCCTCCACCTCATCGATCGCAATCACAGCGTTGAACTTGCATCTGGCGAGTTCACCGCGGTTCGCCTCCGTCAGGGCCAAAGCATCGTAGCTGTTCTTGCTTGCGTCGGTTCGAAATATGGCCTTGACGATTCGAGAGTTCAGTGGCCTCTTGCAAAAGACGAAGCCTCCGTCAAGCTGGACGAATCACACTACTTCTTTTCCCTGCACGTTCCTAAAACCGAGATCCCTGAGGATGATGAATCACACGGGATTCTCAACTATGGTTTAACCTTTGCTTCCAAGGGGCAGAAGGCGTTGCTGAAGAAGTTAGACGATGTTTTGGATTCTTACAGCAGCTTTACTGTGCAGAAGGTGGCGGGAGAAGCGTTACAGGTACTGGATGAGTCAATAGCAAAAGAAGTCGCCCCGGCAGAGATTATTGCTGTCGGACCTGCGAGAGAGATGATGGAGAAGAGATCAGAGATTTATTGGACGACGCTTGCTCCCAATGTGGACGACTATAGTGGGTTGGTTGCGAAGACTATTGCTAAAGGATCAGGACAGCTAATAAAAGGGATTTTGTGGTGCGGGGATGTTACTGTTGAACGGCTCAAGTGGGGAGAGGACATGATGAAGAGAAGATCAAACCCCTCTTCCCAACCGACAGAGGTTAGCAAGGATGCTTTGAAAAACATGAAAAGGGTCAAGCGAGTCACAAAGATGTCAGAGAAAGTGGTATCTGGTGTTCTTGATGGTGTCATTAAGGTATCTGGATTTGTAACCGGCTCTTTAGTAAATTCAAAGGCTGGCAAAAAATTCTTTGGGCTCTTGCCTGGGGAGATTGCTCTTGCTACGCTTGATGGGTTTGGTAAGGTTTCTGATGCTGTTGAAGTGGTTGGAAGGAATGTGTTACAAACATCATCAGTCGTGACGACAAGAGTTGTTTCCCATAGATATGGAGAACAAGCTGGGGAGATTACACATGAAGGGTTTGGCGCTGCAGGACATGCCTTTGGAACTGCTTTGGCTGTTTTCAAGATTCGTAAAGCACTCAATCCTAAAAGTGCTATTAAGCCGTCAAAGTTAGCAAAGACTGCCATCAAGTCAGCTGCTGCTGAGAAGAAAGCTAATACCAACAAGCAAGCCAAAAAATGACTAGTCTCAATTAACCTGCAAAAGATACATAGCTCTGATGTATGCTGCTGTGAATTTCTTAGGAAGTTTGGTTTTCTTGTACACAGATTTTGTTCGCCGTTATTAGTTATTCTGTAAAAAGTGGGTGGGTTAATAAGTGGTTCATTCAGTGGAATTGCTTGTTTGTAAAACTTTTTAATACTTTATACATACAAACAATTCACACACGCACACATGTGTATACATATATATGAAAGCATTTGAATTTAATTTAGGTGGAGTTTTTTAAAAGACTTGCCACAATTCTTACTTACTGATGAATTGTTGTCCAATCTCTCCCATTTCAAGTACTTTTGGATCTTATGAATTATGAACTATTTTC

Network for GWHGAAEX007086

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06911.11	Senescence	267	435	1.00E-47

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19366	SPG20	Endocytosis	map04144

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	48.920
SRP064423	SRR2545915	Juvenile tuber	39.650
SRP108465	SRR5643513	five period of Gastrodia elata	25.050
	SRR5643514	five period of Gastrodia elata	18.410
	SRR5643515	five period of Gastrodia elata	28.660
	SRR5643524	five period of Gastrodia elata	20.350
	SRR5643525	five period of Gastrodia elata	62.090
	SRR5643528	five period of Gastrodia elata	53.670
	SRR5643658	five period of Gastrodia elata	62.600
	SRR5643659	five period of Gastrodia elata	22.180
	SRR5643660	five period of Gastrodia elata	20.600
	SRR5643661	five period of Gastrodia elata	27.400
	SRR5643662	five period of Gastrodia elata	23.350
	SRR5643663	five period of Gastrodia elata	14.640
	SRR5643664	five period of Gastrodia elata	26.350
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	24.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	24.740
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	26.520
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	28.740
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	32.450
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	41.030
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	27.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	24.250
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	43.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	23.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	23.130
SRP279888	Gastro	Gastrodia elata tuber	18.63
	Juven	Juvenile tuber	10.74
	Mother_Gastro	Mother tuber of Gastrodia elata	61.49
	Mother_Juven	Mother tuber of Juvenile	49.41