Detail information of GWHGAAEX007089/evm.TU.scaffold_196.26
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|436833900|ref|YP_007319116.1| | 6.00E-140 | Prolyl oligopeptidase [Fibrella aestuarina BUZ 2] |
| KOG | KOG2237 | 4.00E-171 | Predicted serine protease |
| nr | gi|672136534|ref|XP_008791969.1| | 0 | PREDICTED: LOW QUALITY PROTEIN: prolyl endopeptidase [Phoenix dactylifera] |
| trEMBL | tr|M0RSV5|M0RSV5_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16750_001} |
| trEMBL | tr|M0RSV5|M0RSV5_MUSAM | 6.00E-121 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16750_001} |
| TAIR | AT1G20380 | 4.00E-171 | Prolyl oligopeptidase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000190 | 1381115 | 1391124 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007089
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02897.14 | Peptidase_S9_N | 2 | 231 | 1.40E-75 |
| PF02897.14 | Peptidase_S9_N | 245 | 281 | 1.40E-06 |
| PF00326.20 | Peptidase_S9 | 348 | 578 | 2.90E-63 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01322 | PREP | Renin-angiotensin system | map04614 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0008236 | Molecular Function | serine-type peptidase activity |
| GO:0004252 | Molecular Function | serine-type endopeptidase activity |
| GO:0070008 | Molecular Function | serine-type exopeptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.950 |
| SRR2545915 | Juvenile tuber | 7.340 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.360 |
| SRR5643514 | five period of Gastrodia elata | 5.670 | |
| SRR5643515 | five period of Gastrodia elata | 5.330 | |
| SRR5643524 | five period of Gastrodia elata | 4.940 | |
| SRR5643525 | five period of Gastrodia elata | 2.640 | |
| SRR5643528 | five period of Gastrodia elata | 4.760 | |
| SRR5643658 | five period of Gastrodia elata | 3.060 | |
| SRR5643659 | five period of Gastrodia elata | 1.950 | |
| SRR5643660 | five period of Gastrodia elata | 2.320 | |
| SRR5643661 | five period of Gastrodia elata | 2.450 | |
| SRR5643662 | five period of Gastrodia elata | 2.200 | |
| SRR5643663 | five period of Gastrodia elata | 1.840 | |
| SRR5643664 | five period of Gastrodia elata | 2.350 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.390 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.260 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.770 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 11.830 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.760 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 23.090 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.570 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 12.740 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.610 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.250 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 18.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 18.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.58 |
| Juven | Juvenile tuber | 10.77 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.62 | |
| Mother_Juven | Mother tuber of Juvenile | 10.97 |