Detail information of GWHGAAEX007090/evm.TU.scaffold_196.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|347755600|ref|YP_004863164.1|6.00E-23hypothetical protein [Candidatus Chloracidobacterium thermophilum B]
nrgi|672136537|ref|XP_008791970.1|2.07E-85PREDICTED: UPF0548 protein At2g17695 isoform X1 [Phoenix dactylifera]
Swissprottr|Q8GXB1|U548_ARATH4.00E-78UPF0548 protein At2g17695
trEMBLtr|G7LAA5|G7LAA5_MEDTR9.00E-83UPF0548 plant-like protein {ECO:0000313|EMBL:AET03696.2}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019013945611395576-
Transcript Sequence

Network for GWHGAAEX007090

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09348.9DUF1990532035.40E-43
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.810
SRR2545915Juvenile tuber3.130
SRP108465SRR5643513five period of Gastrodia elata10.230
SRR5643514five period of Gastrodia elata6.850
SRR5643515five period of Gastrodia elata8.090
SRR5643524five period of Gastrodia elata9.150
SRR5643525five period of Gastrodia elata8.930
SRR5643528five period of Gastrodia elata11.360
SRR5643658five period of Gastrodia elata8.310
SRR5643659five period of Gastrodia elata11.460
SRR5643660five period of Gastrodia elata9.600
SRR5643661five period of Gastrodia elata10.540
SRR5643662five period of Gastrodia elata12.100
SRR5643663five period of Gastrodia elata7.640
SRR5643664five period of Gastrodia elata12.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.590
SRR6049655Rhizomagastrodiae_C368-T10_good_113.990
SRR6049656Rhizomagastrodiae_C368-T07_good_19.960
SRR6049657Rhizomagastrodiae_C368-T07_good_110.950
SRR6049658Rhizomagastrodiae_C368-T04_good_110.860
SRR6049659Rhizomagastrodiae_C368-T04_good_112.910
SRR6049660Rhizomagastrodiae_C368-T01_good_111.510
SRR6049661Rhizomagastrodiae_C368-T04_good_18.470
SRR6049662Rhizomagastrodiae_C368-T01_good_116.200
SRR6049663Rhizomagastrodiae_C368-T01_good_114.270
SRR6049664Rhizomagastrodiae_C368-T10_good_111.270
SRR6049665Rhizomagastrodiae_C368-T10_good_111.270
SRP279888GastroGastrodia elata tuber 7.67
JuvenJuvenile tuber14.46
Mother_GastroMother tuber of Gastrodia elata 12.03
Mother_JuvenMother tuber of Juvenile 29.77