Detail information of GWHGAAEX007103/evm.TU.scaffold_197.20
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|158422879|ref|YP_001524171.1| | 5.00E-63 | sugar transporter [Azorhizobium caulinodans ORS 571] |
| KOG | KOG0254 | 0 | Predicted transporter (major facilitator superfamily) |
| nr | gi|719980026|ref|XP_010249665.1| | 0 | PREDICTED: probable plastidic glucose transporter 2 [Nelumbo nucifera] |
| Swissprot | tr|Q2V4B9|PLST3_ARATH | 0 | Probable plastidic glucose transporter 3 |
| trEMBL | tr|M0RIB9|M0RIB9_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P14930_001} |
| TAIR | AT1G67300 | 0 | Major facilitator superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000196 | 725566 | 754608 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007103
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00083.23 | Sugar_tr | 33 | 461 | 1.30E-92 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 27.260 |
| SRR2545915 | Juvenile tuber | 27.390 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 31.010 |
| SRR5643514 | five period of Gastrodia elata | 32.160 | |
| SRR5643515 | five period of Gastrodia elata | 28.060 | |
| SRR5643524 | five period of Gastrodia elata | 32.650 | |
| SRR5643525 | five period of Gastrodia elata | 35.670 | |
| SRR5643528 | five period of Gastrodia elata | 45.270 | |
| SRR5643658 | five period of Gastrodia elata | 31.370 | |
| SRR5643659 | five period of Gastrodia elata | 22.760 | |
| SRR5643660 | five period of Gastrodia elata | 24.020 | |
| SRR5643661 | five period of Gastrodia elata | 25.760 | |
| SRR5643662 | five period of Gastrodia elata | 29.410 | |
| SRR5643663 | five period of Gastrodia elata | 30.610 | |
| SRR5643664 | five period of Gastrodia elata | 27.900 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 26.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 20.080 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.640 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.860 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.040 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 23.760 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.770 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 22.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.640 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 24.790 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 33.300 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 33.300 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 40.34 |
| Juven | Juvenile tuber | 42.60 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 56.41 | |
| Mother_Juven | Mother tuber of Juvenile | 59.19 |