Detail information of GWHGAAEX007104/evm.TU.scaffold_197.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|109898233|ref|YP_661488.1|4.00E-1333-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
KOGKOG16830Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase
nrgi|695043523|ref|XP_009409458.1|0PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein [Musa acuminata subsp. malaccensis]
Swissprottr|Q8W1L6|MFP_ORYSJ03-hydroxyacyl-CoA dehydrogenase
trEMBLtr|M0THH9|M0THH9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P14420_001}
TAIRAT4G290100Enoyl-CoA hydratase/isomerase family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000196833123849111-
Transcript Sequence

Network for GWHGAAEX007104

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.19ECH_1132142.50E-38
PF02737.173HCDH_N3114863.50E-44
PF00725.213HCDH4895768.70E-16
PF00725.213HCDH6277056.80E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10527MFP2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006631Biological Processfatty acid metabolic process
GO:0003857Molecular Function3-hydroxyacyl-CoA dehydrogenase activity
GO:0016491Molecular Functionoxidoreductase activity
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.880
SRR2545915Juvenile tuber75.960
SRP108465SRR5643513five period of Gastrodia elata121.980
SRR5643514five period of Gastrodia elata85.350
SRR5643515five period of Gastrodia elata119.860
SRR5643524five period of Gastrodia elata106.950
SRR5643525five period of Gastrodia elata54.630
SRR5643528five period of Gastrodia elata69.170
SRR5643658five period of Gastrodia elata68.090
SRR5643659five period of Gastrodia elata114.430
SRR5643660five period of Gastrodia elata108.630
SRR5643661five period of Gastrodia elata121.450
SRR5643662five period of Gastrodia elata105.150
SRR5643663five period of Gastrodia elata143.340
SRR5643664five period of Gastrodia elata68.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_168.450
SRR6049655Rhizomagastrodiae_C368-T10_good_161.200
SRR6049656Rhizomagastrodiae_C368-T07_good_180.090
SRR6049657Rhizomagastrodiae_C368-T07_good_156.130
SRR6049658Rhizomagastrodiae_C368-T04_good_156.500
SRR6049659Rhizomagastrodiae_C368-T04_good_150.420
SRR6049660Rhizomagastrodiae_C368-T01_good_165.300
SRR6049661Rhizomagastrodiae_C368-T04_good_157.610
SRR6049662Rhizomagastrodiae_C368-T01_good_1145.710
SRR6049663Rhizomagastrodiae_C368-T01_good_190.140
SRR6049664Rhizomagastrodiae_C368-T10_good_198.680
SRR6049665Rhizomagastrodiae_C368-T10_good_198.680
SRP279888GastroGastrodia elata tuber 68.36
JuvenJuvenile tuber107.27
Mother_GastroMother tuber of Gastrodia elata 55.83
Mother_JuvenMother tuber of Juvenile 70.94